Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1430 ATGACTTCCCTCTCAAACTCTAACAGTGGCCACGACGGCTCCTTCTTCAAGATGCCCACCATCAAGTTTACCAAGCTCTTCATCAATGGAAATTTTGTTGATTCCATATCAGGAAGGACATTTGAGACTATAGATCCTAGAACAGAAGAGGTGATTGTAAGAGTTAGCGAGGCAGATAAAGAAGACATTGACTTAGCCGTTAAAGCGGCCCGTGAAGCATTTGACTCAGGCCCATGGCCTCGCTTGCCCGGTTCTGAAAGGGCAAAAATTATGATGAAATGGGCAGAGCTAATTGATGAAAATGTAGATGAACTAGCTGCATTAGAAACGATAGATGCTGGCAAGCTGTACCATTTTAATAAGGTTGTGGAAATTCCTGCGGCTGCTAGTACGCTACGTTATTATGCAGGTGCTGCTGATAAAATTCATGGCGAGGTATTAAAAATGAGCCAGGAGTTCCATGCATATACACTGTTGGAACCAATTGGTGTTGTGGGACACATAATTCCCTGGAATGCACCAACCTCCATGTTCTTCACCAAGGTTAGCCCTTCCTTAGCTGCAGGGTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTTTCATGCTCATTTGGCTAAGTTGGCTGGAATCCCAGATGGAGTGCTCAATGTAGTACCAGGATTTGGCCCAACTGCTGGTGCTGCAGTTAGCTCACACATGGATATTGATGCGGTTAGCTTTACTGGTTCAATTGAAGTAGGACGTGAAGTAATGCAAGCTGCTGCTAGGAGTAATCTAAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCTCTCATTATTTTTGATGATGCTGATATAGACAAAGCTGCTGAGCTTGCTATCTTGGGCGTCTTGATTAACAAGGGAGAAATTTGTGTAGCAAGTTCTCGTGTGTTCGTTCAAGAAGGGATTTATGATGAATTTGAGAAGAAGTTAGTGGAGAAGGCCAAATCTTGGATAGTTGGAGACCCTTTTAATCCTAAATCACAGCAAGGACCTCAAGCTGACAAAAACCAATTTGAAAAAATACTTTCCTATATTGAGCATGGAAAAAGAGAAGGAGCAATCATTTTGACGGGAGGCAAAATAGTGGGCAACAGGGGCTACTACATTGAACCTACAGTATTTTCTAATGTAAAGGAGGACATGCTCATAGCACAAGATGAAATATTTGGCCCTGTAATGGCGCTAATGAAGTTTAAGACCATTGAGGAAGCAATTAAAAGTGCTAACAATAGCAAGTATGGCCTAGCAGCAGGCATTGTAACCAAGAATTTGGATACTGCAAACACTATGTCAAGGTCCATTCGTGCAGGCACTATTTGGATAAATTGCTATTTTGCGTTTGGGAATGACGTTCCTTTTGGAGGGTACAAAATGAGTGGATTTGGAAGAGATTTGGGATTGGAGGCCCTCCACAAGTACTTACAAGTTAAATCTGTTGTAACACCTATTTACAATTCTCCTTGGCTTTGA 1515 0.4251 MTSLSNSNSGHDGSFFKMPTIKFTKLFINGNFVDSISGRTFETIDPRTEEVIVRVSEADKEDIDLAVKAAREAFDSGPWPRLPGSERAKIMMKWAELIDENVDELAALETIDAGKLYHFNKVVEIPAAASTLRYYAGAADKIHGEVLKMSQEFHAYTLLEPIGVVGHIIPWNAPTSMFFTKVSPSLAAGCTMVLKPAEQTPLSALFHAHLAKLAGIPDGVLNVVPGFGPTAGAAVSSHMDIDAVSFTGSIEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADIDKAAELAILGVLINKGEICVASSRVFVQEGIYDEFEKKLVEKAKSWIVGDPFNPKSQQGPQADKNQFEKILSYIEHGKREGAIILTGGKIVGNRGYYIEPTVFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNSKYGLAAGIVTKNLDTANTMSRSIRAGTIWINCYFAFGNDVPFGGYKMSGFGRDLGLEALHKYLQVKSVVTPIYNSPWL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1430 504 Pfam Aldehyde dehydrogenase family 33 494 IPR015590 GO:0016491
Apr2g1430 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Apr2g1430 504 SUPERFAMILY ALDH-like 16 500 IPR016161 GO:0016491
Apr2g1430 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Apr2g1430 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Apr2g1430 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Apr2g1430 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 504 - -
Apr2g1430 504 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 5 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1430 Apr-Chr2 20341885 20346142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1430 17 504 Aldehyde Dehydrogenase Gene Family AT3G24503 69.530 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1430 K12355 - gmx:100527654 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1430 2 20341885 20346142 Apr6g1107 6 15739932 15745672 PCT