Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1429 ATGACCGGCGTTGATTACGGCGAAGGCGACTCCGTCAACAAGGTTCCGACCGTCAAGTTCACCAAGCTCTTCATTAACGGAAATTTTGTTGACTCCGTATCAGGAAAGACATTTGAGACGATAGATCCAAGAACAGGGGACGTGATAGCGAGGATCAGCGAGGGAACCGAAGAAGACATCGATATTGCCGTAAAGGCCGCACGTCAGGCATTTGACTTCGGCCCATGGCCCCGTCTACCTGGAGCTGAGAGAGCAAAAATTATGATGAAATTGGCAGACCTAATCGATGAAAACGTAGAAGAACTAGCAGCACTAGATGCCATTGATGCTGGCAAGTTGTACCATATGTGTAAGAATATGGAAGTTCCAGCAGCAGCAAACACTCTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAAATGGCCCGCGAGTTTCAAGCATATACATTGATGGAACCAGTTGGTGTTGTGGGACACATAATTCCCTGGAATTTCCCCACTACCATGTTCTTCATCAAGGTTAGCCCTTCTTTAGCTGCTGGGTGCACCATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCTGCTTTGTATTATGCCCATCTTGCTAAATTGGCTGGAATCCCGGATGGAGTAATCAATGTAGTGCCTGGATTTGGTCCAATTGCTGGTGCTGCAGTTAGCTCACACATGGATATTGATGCGGTCAGCTTCACTGGGTCAACAAAAACTGGCCGTGAGATAATGCAGGCTGCTGCTAAGAGTAACTTAAAACAAGTATCACTTGAATTAGGAGGCAAGTCACCCCTTATAATTTTTGATGATGCTGATATAGACAAAGCTTCTGAGCTTGCTCTATTGGGAATCTTATATAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTTGTGCAAGAAGGAATATACGACGAATTTGAGAAAAAATTGGTAGAAAAGGCAAAAGCTTGGATTGTTGGGGATCCTTTTGATCCTAAAGTTCAGCAAGGGCCTCAAGTTGACAAGAGACAATTTGAAAAAGTTATTTCATATATTGAGCATGGGAAGAGAGAAGGAGCTACCCTTTTGACCGGGGGAAAAACTTTGGGCAACAAAGGCTACTACATTGAGCCCACAATTTTCTCTGATATAAAGGACGATATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGGCGCTGAAGAAGTTTAAGACTATTGAGGAAGCAATTAAGAATGCAAACAACACTAAGTATGGCCTAGCAGCAGGCATTGTGACCAAGAACTTGGATACTGCAAACACAGTGTCAAGGTCCATTCGTGCAGGCACTATTTGGATCAACTGTTATTTTGCCATAGGGGATGATGTTCCTTTTGGAGGATATAAAATGAGTGGATTTGGAAAAGATCATGGAATGGAAGCCCTTTACAAGTATCTACAAATTAAATCAGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1506 0.4323 MTGVDYGEGDSVNKVPTVKFTKLFINGNFVDSVSGKTFETIDPRTGDVIARISEGTEEDIDIAVKAARQAFDFGPWPRLPGAERAKIMMKLADLIDENVEELAALDAIDAGKLYHMCKNMEVPAAANTLRYYAGAADKIHGEVLKMAREFQAYTLMEPVGVVGHIIPWNFPTTMFFIKVSPSLAAGCTMVLKPAEQTPLSALYYAHLAKLAGIPDGVINVVPGFGPIAGAAVSSHMDIDAVSFTGSTKTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKASELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKAWIVGDPFDPKVQQGPQVDKRQFEKVISYIEHGKREGATLLTGGKTLGNKGYYIEPTIFSDIKDDMLIAQDEIFGPVMALKKFKTIEEAIKNANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAIGDDVPFGGYKMSGFGKDHGMEALYKYLQIKSVVTPIYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1429 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Apr2g1429 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 3 501 - -
Apr2g1429 501 SUPERFAMILY ALDH-like 15 497 IPR016161 GO:0016491
Apr2g1429 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 501 - -
Apr2g1429 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Apr2g1429 501 Pfam Aldehyde dehydrogenase family 29 491 IPR015590 GO:0016491
Apr2g1429 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Apr2g1429 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1429 Apr-Chr2 20333680 20339267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1429 9 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.040 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1429 K12355 - gmx:100811540 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1429 2 20333680 20339267 Apr6g1108 6 15756038 15759606 PCT