Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1418 ATGCCATCCCTCTCTATCTTCCCATCACTCCCATCGCTTCAAAACCCTAACTTGGACCATGCCCACTTCTACAATCCCTTCAAATTCGTCATTCCCCGTTTAAATTCAACGATTCCTTCATCATATGCACGCTGTCACCGTAGAATCCACTGCAAAGCTTTGAGGGATTCCGGCGAGGACATTAAGGCGGTGTTCAAGTCCGATAACGGCGGAGGCAGCGGGGGCGACGGCGACGGCGGGGGTGGGGGTGGGGGTGACCGGGATGTGGAGAAGAAAGAAGGGTCTTCTGGGCCTTTGCCAGAGTGGTTGAATTTCACTTCTGATGATGCAAAAACGGTTCTTGCTGCTCTGGCAATATCGCTTGCGTTTCGCACGTTCGTGGCTGAGCCTAGGTACATTCCTTCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGAATTGTTGCTGAAAAGGTTTCATACTATTTTAGAAAACCTTGTGCAAGTGACATAGTAATATTTAAAAGCCCTCCGGTCCTTCAAGAAGTTGGATACACTGATGATGATGTTTTTATAAAACGTGTGGTGGCGAAGGAAGGTGATATCGTCGAGGTTCGTAAAGGGCATCTTGTAGTTAATGGGGTTGAGAGGAGTGAAGAGTACATACTTGAACCACCTTCTTATGAGATGAAACCCACACGTGTGCCAGAGAACTACGTTTTTGTGATGGGAGACAACCGCAATAACAGTTATGATTCTCATGTGTGGGGTCCCCTGCCAGCCAAGAATATCATAGGTAGATCAGTACTTCGATATTGGCCACCAAATAGAATTGCGGGCACAATTTCTAAGGAAACATGCCCTGTCGAAACAAAGCAGGAGACTACTCTAGCATCCCAATGA 885 0.4701 MPSLSIFPSLPSLQNPNLDHAHFYNPFKFVIPRLNSTIPSSYARCHRRIHCKALRDSGEDIKAVFKSDNGGGSGGDGDGGGGGGGDRDVEKKEGSSGPLPEWLNFTSDDAKTVLAALAISLAFRTFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERSEEYILEPPSYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVLRYWPPNRIAGTISKETCPVETKQETTLASQ* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1418 294 SUPERFAMILY LexA/Signal peptidase 124 273 IPR036286 -
Apr2g1418 294 Pfam Signal peptidase, peptidase S26 110 267 IPR019533 GO:0004252|GO:0006465
Apr2g1418 294 Gene3D Umud Fragment, subunit A 123 281 - -
Apr2g1418 294 PRINTS Bacterial leader peptidase 1 (S26A) family signature 126 142 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g1418 294 PRINTS Bacterial leader peptidase 1 (S26A) family signature 185 197 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g1418 294 PRINTS Bacterial leader peptidase 1 (S26A) family signature 229 248 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g1418 294 MobiDBLite consensus disorder prediction 65 100 - -
Apr2g1418 294 TIGRFAM sigpep_I_bact: signal peptidase I 111 269 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g1418 294 ProSitePatterns Signal peptidases I serine active site. 135 142 IPR019756 GO:0004252|GO:0016021
Apr2g1418 294 PANTHER SIGNAL PEPTIDASE I 94 279 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr2g1418 294 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 94 279 - -
Apr2g1418 294 CDD S26_SPase_I 129 261 IPR019533 GO:0004252|GO:0006465
Apr2g1418 294 ProSitePatterns Signal peptidases I signature 3. 234 247 IPR019758 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1418 Apr-Chr2 20242379 20244595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1418 138 268 MADS-box Gene Family AT1G29960 31.818 1.46e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1418 K03100 - gmx:100815810 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1418 2 20242379 20244595 Apr2g1418 2 20242379 20244595 ECH