Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1415 ATGTATAGATCATTTCTGACATGTGATGATCCCAAAGGAGTTGTAGGATGTGGGACTATCAGGAAATACAGGACTTGTTCTCACAAAATGAAGGACAAGACTAAAGTCCAGAAGAGAGATGAACACTTAGAGACATCCTTGATGAACAAAAGATACAACAAAGAAGAGAAGTTCCCAAAAGGAACTGATGGAAGTCTCATTGGTCCATCATCCATGCAGCTCTCACAGGTCTCTAGAGGGGACCAAAGTTTGAACAACATGATAGATTCATGGTCTAGAGATCTTATATATGGTGAAAAGTCTGAAGATATTGCACAACATATTCTAAAAGGTGCTCTAGATTTGCAAGATTCTCTAATCATGCTTCGCAAGTTGCAAGAGGCTTCGCAGCATACAACTCCTTTTAGGAGAAAACAGACAGAGAAACTCAAAAGAGATACAATTGATGCAAAGATGATTGGTAAAATGCAAGCTAATCCATTTAGTGAACAAAGTAATCCAAAGGGGCTTCAAAGTCCTCAACCTTGTGCTGGTGGTTCTTCAAGTAATTGCAAAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCGACAATGACCACTGAAGGATTGAATTCAGCTTCAGAAACTTTTTCCACAAGTCCAAGTCACTCTTCTGGGGTCAGGACTAACAGCATTTCTGATCCTTCTTTCTCAGTAATAGCTCCAAAGGTGGAAAGAGGACCCAGCCTAGTAGTCAAGTTGATGGGTTTAGAAGAACCCCCCTCAAGATCATTTCCATCTGTCATGCAGAAACAGTTGGATGGTGAAAAGATTATGAACCAGAAGAGACCTATATTTGATATAGATATGTCAAAGGTAGCAAAGAATGATTTCATAGCTGAGAAGATTAGTCCAGAAGAAAAGGCCCCAAGGGAAACTCTTGACACCATGCATTTCAAAGGACTTCTCAACAAGAGTTTTGTCAAAGAGCATAAGCTTCAGGTCCATCATCTCAATCATCCAAATTCCAAGCAGATAATGAAAACTCAATGCACTCTATACCAGGAATCAGTGAAAACCCCTACACGAGAAGAGCTATCCATGAGAAAACTGAAAGCAGAAATAGTCTATTCCAAAAATGTCAAACACAGAAAAGGTTCCAGTTCCACCAACATGGTAAAAGAAATGGAAAAAGGTGAAACCAAACGGCTCAACAAAGAAGAAGAACCTAAATTTCTCAAGGAGGTCGTGAAACCAGATGCAAAAGGAATCATTCTTCCTATTGAAGCATCATCAGGTAAAGTAAAACTGTATTGTCACACTGGTTACACATCACGGGTGAACGAGACAATTGATAAAAAATGGAAGGTGCAAACCATTAGTAGAAAACAGCCAGAAAATGCAAGGCATCAATATCAACGAGAAATCACTACCCCCACAAAATTGAGGAAGTCAAAAAGTAGGTCCACAATCGATAAGGCTGAGAATTCCCACCTAAAGAGCACAGGTTCAGACAATATCTCCATCTCAAAAACAGAGGCACCAGGAACTAATAATTCCAAGGAGCTCAATATGGAGATTAAAAATTTTGATTCTGTGGTAGATTCCTTGATACTTGGAAAGAATCAGATGAAGAACCATTGTCCTGTTTCTGAGCCTAAGCCAGCTAAACTAATTGTTGATCAAATCAAGCAGGGAATAGAAAATAAAACTATTGATGTTCCTGGTAAGGAGGATTTTACTGAGATTAGGATGGCTAATACAGTAGTAGATGAACTCCTGATGGTGTGTGAAGCAGATGCCTGCACAAAATGGAAGGTGAACAAGTGTTCTTCAAGCAATGACATTATGCTGCTAAACTCTGAACATGAAAATGATTCTACCCTTGCTGAAGAAGCTCATGAAAACACTAAATGCAGTGAAGCTGATGATAGCATTAACCATGACCAAGAAGGGACTGAACTGAAACATTTTCTCTTAACCAGTGAATCATTCATTGGACATGCAAAGCAGTTCTTTAATCTTGATTGGGATTGGGCCAAGATCCTACAAAAAGGTGAAACTAACTATGGCATGGACAATCTGAGACTTTATTTGGATTATGCAAATGAAGTCATTGAGCTTAAAAGCCTTCAAGAGTCACAAGTAGTTTGTTCTTTCTTGCTAGCATGTAGGGGGGACTCAAGATTACACATCTCCTTAGGCAAGTTGGTTGAAGAAATCTATAATGCCATTGAGAATCTGAAATTTTACAATGAAAAACCTTTTGCTGGCAATGTCTTTGCAATAATGGAGAAAGATATGAAATGCAATGGAGTGATAAATAGTATGTGGGAGAGGGGTTGGAGGCATGGATTTTCTGCAGATGAGGCTGAGCTAGTTGTCAATAAAATAGAGACCCTGCTTCTAATTGGATTAATTGAGGAGCTTATTATAAATTTATGA 2445 0.3873 MYRSFLTCDDPKGVVGCGTIRKYRTCSHKMKDKTKVQKRDEHLETSLMNKRYNKEEKFPKGTDGSLIGPSSMQLSQVSRGDQSLNNMIDSWSRDLIYGEKSEDIAQHILKGALDLQDSLIMLRKLQEASQHTTPFRRKQTEKLKRDTIDAKMIGKMQANPFSEQSNPKGLQSPQPCAGGSSSNCKEELKKVIKESLVRQNMFPTMTTEGLNSASETFSTSPSHSSGVRTNSISDPSFSVIAPKVERGPSLVVKLMGLEEPPSRSFPSVMQKQLDGEKIMNQKRPIFDIDMSKVAKNDFIAEKISPEEKAPRETLDTMHFKGLLNKSFVKEHKLQVHHLNHPNSKQIMKTQCTLYQESVKTPTREELSMRKLKAEIVYSKNVKHRKGSSSTNMVKEMEKGETKRLNKEEEPKFLKEVVKPDAKGIILPIEASSGKVKLYCHTGYTSRVNETIDKKWKVQTISRKQPENARHQYQREITTPTKLRKSKSRSTIDKAENSHLKSTGSDNISISKTEAPGTNNSKELNMEIKNFDSVVDSLILGKNQMKNHCPVSEPKPAKLIVDQIKQGIENKTIDVPGKEDFTEIRMANTVVDELLMVCEADACTKWKVNKCSSSNDIMLLNSEHENDSTLAEEAHENTKCSEADDSINHDQEGTELKHFLLTSESFIGHAKQFFNLDWDWAKILQKGETNYGMDNLRLYLDYANEVIELKSLQESQVVCSFLLACRGDSRLHISLGKLVEEIYNAIENLKFYNEKPFAGNVFAIMEKDMKCNGVINSMWERGWRHGFSADEAELVVNKIETLLLIGLIEELIINL* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1415 814 MobiDBLite consensus disorder prediction 461 475 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 159 183 - -
Apr2g1415 814 PANTHER OS01G0228800 PROTEIN-RELATED 1 812 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 210 230 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 500 521 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 388 406 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 159 181 - -
Apr2g1415 814 PANTHER OS01G0228800 PROTEIN 1 812 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 382 406 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 461 521 - -
Apr2g1415 814 MobiDBLite consensus disorder prediction 476 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1415 Apr-Chr2 20224516 20227288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1415 608 811 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 28.319 7.71e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1415 - - var:108346558 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1415 2 20224516 20227288 Apr2g1415 2 20224516 20227288 ECH
Apr2g1415 2 20224516 20227288 Apr6g1129 6 15955281 15959319 PCT