Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1411 ATGGGGGAAGGTGAAGGTGAAGGGAGTGATTACCCTTCTAAAAGTGTGTCAAACGATGCCGTTGCACCTGCACTGTTGTCCTCCGATGTTCCCGCCAAGAAGCTTGCGAGGCAACTCGATTTCACCGCTTTTGCCGGGATGCCGCCGCCGGAATACCCCCAGCCGCCAGTTACTTTGACGCCGGTGCCGACTATGCCGCAGCCTGCGATTCCTTCCCTGAGGGCTGGGAAACCAGAATCTCCAAAGTCGAGATCGAGACCTAACTTTGAAATTAAAGAAGGTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACATTCAAAATGCTTAAAGCTATATTGTGAATGTTTTGCGTCAGGAATATACTGCGATGGTTGCAATTGTGTAAATTGTTATAACAATGTTGAAAATGAAGCTGCTAGAAGAGAAGCTGTTGAAGCTACTTTGGAACGAAATCCAAATGCATTTAGGCCGAAAATTGCAAGCAGCCCTCATGGAACACGTGATAGCAGGGAGGAGGCCGGGGAAGTTTTGATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTACCATGGAGATCAAAATAACAACATGGTGTATATTCAGCAGGCGGCAAATGCTGCCATTACTGGAGCTATTGGTTCCTCTGGTTACTCATCACCGCCAATATCAAAAAAAAGAAAAGGTCAGGAGCTCTTCTTTGGGACAACTGTCAAGGATCCATCAGTTAGCAGGCTAGGACAACAGGCAAACCATGTCAGAGGTCCTGCACCCTCCTCCTCAACGTCTCCTGTCCCAGGTGCTCGTGTTGGACCTGCAACTTTAGGTCCTTCAAAATTAATGTACAGGTCTCTTTTAGCAGACATAATACAACCACAGCACCTGAAGGAGCTTTGCTCAGTTCTGGTGCTAGTGTCTGGACAAACCGCTAAGACACTTACAGACCAGAAGAATTCAATGGATAAGCATACGGAAGATCAGACAGTAACTTCCCTTGCTTCAACTCAGGAGCAATTACCTAGTCAAAAGGAAGCTGATGTTGAGAAAGCTATGACTGACAATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCACTCAATTCTTGCTCAGATGGTGCTGATGTCCCAAAGGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGATGAGCAAGATCCAATGTTCACGACTGCTGCCTCCCCTGTTGGACCAATGGCGCATGCTTGCAACACATCTTTGCAACTGCCAAATGGACAGGGAGTGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTTAGAGATTTTCTGAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCCAGAAGTGAATTAGAGAGTCAAAAGAACCCAAACATCAATTGTTCTGTTAATGTCAGTACCGAGATGGCGCATCAGCAGGGAGCCATCAATAATGGTGTTGCCAATGCTGCGGGAAACACTGTTACATCTACATCATTGGTCCCAGGTAGCATTGTTCCTGAAAATGGGGATACTAGGACTAACGTTGAAAAATAG 1698 0.4505 MGEGEGEGSDYPSKSVSNDAVAPALLSSDVPAKKLARQLDFTAFAGMPPPEYPQPPVTLTPVPTMPQPAIPSLRAGKPESPKSRSRPNFEIKEGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALYHGDQNNNMVYIQQAANAAITGAIGSSGYSSPPISKKRKGQELFFGTTVKDPSVSRLGQQANHVRGPAPSSSTSPVPGARVGPATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQTAKTLTDQKNSMDKHTEDQTVTSLASTQEQLPSQKEADVEKAMTDNCSSANQTDKISPLNSCSDGADVPKGRPMSPGTLALMCDEQDPMFTTAASPVGPMAHACNTSLQLPNGQGVTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELESQKNPNINCSVNVSTEMAHQQGAINNGVANAAGNTVTSTSLVPGSIVPENGDTRTNVEK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1411 565 SMART CXC_2 97 137 IPR033467 -
Apr2g1411 565 SMART CXC_2 182 223 IPR033467 -
Apr2g1411 565 MobiDBLite consensus disorder prediction 44 92 - -
Apr2g1411 565 MobiDBLite consensus disorder prediction 355 419 - -
Apr2g1411 565 MobiDBLite consensus disorder prediction 365 381 - -
Apr2g1411 565 MobiDBLite consensus disorder prediction 288 307 - -
Apr2g1411 565 MobiDBLite consensus disorder prediction 392 408 - -
Apr2g1411 565 Coils Coil 132 152 - -
Apr2g1411 565 MobiDBLite consensus disorder prediction 288 312 - -
Apr2g1411 565 ProSiteProfiles CRC domain profile. 98 222 IPR005172 -
Apr2g1411 565 PANTHER TESMIN/TSO1-RELATED 68 530 IPR028307 -
Apr2g1411 565 MobiDBLite consensus disorder prediction 48 68 - -
Apr2g1411 565 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 185 219 IPR005172 -
Apr2g1411 565 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 99 134 IPR005172 -
Apr2g1411 565 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 68 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1411 Apr-Chr2 20197537 20204052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1411 1 506 CPP Transcription Factor Family AT4G29000 55.616 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Apr2g1411 TCR 3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1411 - - gmx:100786353 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1411 2 20197537 20204052 Apr2g1411 2 20197537 20204052 ECH