Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1410 ATGGAGCCTCCACCACCCAAGAGCTGGAGCATCCATACTCGATCCGAAATCATCGCCAAATACCAGATAATGGAACGGGTCGGGTCAGGCGCTTACGCCGACGTCTACCGTGCCTGTCGTCTCTCCGACGGCCTCACCGTCGCCCTCAAGGAAATCCACGACTACCAATCCGCGTTCCGAGAAATCGACGCGCTTCAGCTTCTGCAAGGCTCCCCAAACGTCGTCGTTTTGCACGAGTACTTCTGGCGCGACGACGAGGACGCCGTCCTCGTCCTCGAGTACCTCAGAACCGACCTTGCCACCGTCATCGCCGACGCCGCCAAGGCTAATGAACCTCTCCCCGTCGGCGAGATCAAGCGCTGGATGATCCAGATTCTCTCCGGCGTCGACGCCTGTCACCGCAACATGGTCCTCCATCGAGATTTGAAGCCATCTAATCTCTTGATTTCCGATAACGGACTCCTCAAACTCGCAGATTTCGGACAAGCGAGGATTCTTACGGAGCCTCGATTCGATGCTTCGGAGGATAACACTTATAATAACGAAGAAAGTTCTAGAGTTTTAGATGAGATTGATAAGGACGCTAACATTCGTGACGGAAACGCAACATGCAACACTAGTGACGTAGATAATGAAATGCGGGAAGGGGAAGATGAAGAACCTGGTTGTTTCACATCGTGCGTTGGAACTCGTTGGTTCAGGGCTCCTGAGTTGCTTTATGGATCCAGAGACTACGGTTTAGAGATTGATTTATGGTCCTTGGGATGTGTCTTTGCAGAGCTTTTAACTCTGCAGCCTTTGTTTCCTGGAACTGCTGATATTGATCAACTCAGCAGAATCATTAGTGTTTTGGGTAACCTTGATGAGAATCTTTGGCCTGGTTGTTCTAAGCTTCCTGATTATGGAATCATATCGTTTAGCAAGGTGGAAAACCCTGCTGGTATTGAAGCCTGTTTGCCCAATCGTTCGCCGGATGAAGTGTCTCTGGTTAAGAGGTTGGTTTGTTATAATCCGCCGAGGAGGGCTACGGCAATGGAATTGCTTTGTGACAAGTACTTTAGTGAAGAACCTCTTCCTGTTCCTGTTTCTGAGCTGAGAGTTCCTTTGACAAGAAAGGAAGGGGATGAGGATTCCCCTGGTAGTGGGTGGCTTGATTATGAGGACATGGGTTCTGATTCTGATTTCGATGACTTTGGCCCTCTGAATATCACCAGAACGGGAACCGGTTTCTCCATACAGTTTCCTTGA 1248 0.4976 MEPPPPKSWSIHTRSEIIAKYQIMERVGSGAYADVYRACRLSDGLTVALKEIHDYQSAFREIDALQLLQGSPNVVVLHEYFWRDDEDAVLVLEYLRTDLATVIADAAKANEPLPVGEIKRWMIQILSGVDACHRNMVLHRDLKPSNLLISDNGLLKLADFGQARILTEPRFDASEDNTYNNEESSRVLDEIDKDANIRDGNATCNTSDVDNEMREGEDEEPGCFTSCVGTRWFRAPELLYGSRDYGLEIDLWSLGCVFAELLTLQPLFPGTADIDQLSRIISVLGNLDENLWPGCSKLPDYGIISFSKVENPAGIEACLPNRSPDEVSLVKRLVCYNPPRRATAMELLCDKYFSEEPLPVPVSELRVPLTRKEGDEDSPGSGWLDYEDMGSDSDFDDFGPLNITRTGTGFSIQFP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1410 415 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Apr2g1410 415 Gene3D Transferase(Phosphotransferase) domain 1 108 356 - -
Apr2g1410 415 ProSiteProfiles Protein kinase domain profile. 21 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1410 415 PANTHER CYCLIN-DEPENDENT KINASE 10 13 363 - -
Apr2g1410 415 Pfam Protein kinase domain 21 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1410 415 Pfam Protein kinase domain 220 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1410 415 PANTHER CELL DIVISION PROTEIN KINASE 13 363 - -
Apr2g1410 415 SMART serkin_6 21 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1410 415 SUPERFAMILY Protein kinase-like (PK-like) 14 359 IPR011009 -
Apr2g1410 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Apr2g1410 415 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1410 Apr-Chr2 20191297 20194443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1410 1 415 Core Cell Cycle Gene Families AT4G28980 58.750 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Apr2g1410 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1410 - - aprc:113855115 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1410 2 20191297 20194443 Apr2g1410 2 20191297 20194443 ECH
Apr2g1410 2 20191297 20194443 Apr6g1136 6 16001735 16004709 PCT