Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1399 ATGGTGAGAGTGATTCCCATGGCTTCTTCGATTCGACCCACTCTCTCCTCACTTAGGTTTTCATCACCTTCTTCTCTCTCTCTCTTCAACCCTTCTCCTCTTCTCTCTTCCTTCAATCTTCCCACTGTGTCTCAATCCCCTAGTTTTGGCCTGAAAGCATCTAGGATGTTCAGACAAGATGGTAAATCCATGAGAGTGATGGCATCAGGGAACGTGTCCCAATCAGTCACAGCTGCTTCACAAGAAAATGTACTTGAATGGGTGAAGCAGGATAAGAGAAGAATGCTCCATGTTGTATATCGTGTTGGGGATTTGGACAGGACCATAAAGTTTTATACCGAATGCCTGGGAATGAAGCTCCTCAGAAAGCGGGACATACCGGAAGAGAGATACACTAATGCCTTCCTTGGATATGGGCCCGAAGACTCACACTTTGTTATTGAACTGACATACAATTATGGGGTTGACAAGTATGATATTGGAACTGGATTTGGCCATTTTGGTATTGCTGTTGATGATGTTGCAAAAGCAGTGGAGCTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCCGTTCAGTAATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTCTGGAAAGAGGTCCTACTCCTGAACCTTTGTGTCAAGTAATGCTTCGAGTGGGTGATCTCAATCGTTCCATAGAATTTTATGAGAAGGCATTTGGTATGGAGCTGCTTCGTACACGAGATAATCCAGATTACAAGTATACCATAGCAATGTTGGGATATGGTCCAGAAGATAAAAGTACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAACGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCGGTTAAACTAGCTGGAGGAAAGGTTACTCGGGAACCTGGACCATTACCTGGTATCAACACAAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTCTTAAGGAGTTGGAGTAG 1071 0.4267 MVRVIPMASSIRPTLSSLRFSSPSSLSLFNPSPLLSSFNLPTVSQSPSFGLKASRMFRQDGKSMRVMASGNVSQSVTAASQENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDVAKAVELIRAKGGKITREPGPVKGGRSVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAVKLAGGKVTREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1399 356 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 24 356 - -
Apr2g1399 356 CDD GlxI_Ni 95 216 - -
Apr2g1399 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 225 348 IPR029068 -
Apr2g1399 356 TIGRFAM glyox_I: lactoylglutathione lyase 225 348 IPR004361 GO:0004462|GO:0046872
Apr2g1399 356 TIGRFAM glyox_I: lactoylglutathione lyase 80 227 IPR004361 GO:0004462|GO:0046872
Apr2g1399 356 ProSitePatterns Glyoxalase I signature 2. 161 173 IPR018146 GO:0004462|GO:0046872
Apr2g1399 356 Gene3D - 221 356 IPR029068 -
Apr2g1399 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 94 218 IPR037523 -
Apr2g1399 356 ProSitePatterns Glyoxalase I signature 1. 227 248 IPR018146 GO:0004462|GO:0046872
Apr2g1399 356 Gene3D - 65 219 IPR029068 -
Apr2g1399 356 CDD GlxI_Ni 225 346 - -
Apr2g1399 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 227 342 IPR004360 -
Apr2g1399 356 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 95 215 IPR004360 -
Apr2g1399 356 PANTHER LACTOYLGLUTATHIONE LYASE 24 356 - -
Apr2g1399 356 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 93 223 IPR029068 -
Apr2g1399 356 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 224 348 IPR037523 -
Apr2g1399 356 ProSitePatterns Glyoxalase I signature 1. 97 118 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1399 Apr-Chr2 20068642 20072850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1399 227 345 Calmodulin-binding Proteins AT1G08110 27.586 5.47e-10 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1399 2 20068642 20072850 Apr2g1399 2 20068642 20072850 ECH
Apr2g1399 2 20068642 20072850 Apr6g1151 6 16169896 16173036 PCT