Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1382 ATGGAGGAGGATGACCAACTCGAACGATTCGACTCCGAGTTTGCTTCCACCAGTTCCGGCTCCGGCATTTCCTCCATACTCAGCACCGAAGATTTCCGGAACCTCACCAGCTCCGGCGACATTTCCTCTATCAGCAGCGGCTCCGGCGAGATTCCGCCCGTCGCCGTGACCGAGGCGGTTCTCGTGCCGCCGTTGCTTCACCGCGCTGGTTCCAATGGCGACGATGGCGAGCCAGCCATGCCGCCCGCGTTGAGGGAGAAGTGCGTGGGAAGGAGTAGCAAGGGAGTGAGCTGGGGACACACTTCGGTGATTGGGAGGCGGAGAGAGATGGAAGACGCCCTCGCCGTTATTCCAGGGTTCATGTCTCGCACGTGCGATCATGTCGGTGGTTGTGCTGCTCCCGGCTCCAGATCCTCCGGCGAGATCTCTCCCGTTCATTTCTTCGGTGTTTACGACGGCCACGGTGGCTCTCAGGTGGCGAAGTTTTGTGCCAAGCGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGCAGGTGGCACTGAATGGCAGAGAAGGTGGGAAGCCGTATTTGCTAACAGTTTTGAGAGAACTGACAATGAAATCCTATCAGACGCAGTTGCACCAGAAATGGTAGGATCTACTGCCTCTGTGGTGGTTCTATCTGGTTGTCAAATTATTACATCCAACTGTGGCGATTCAAGGGTAGTTCTTTGCCGCAGGACACAAACAATCCCCCTGACAGTGGATCAGAAGCCGGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGGGATCGGTATTTGAGGCCATGGATTATTCCGGTGCCAGAGATAACTTTTACATCAAGAACTGACGAGGATGAGTGCTTAATTTTAGCAAGTGACGGACTTTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCACATTCTTAGAAGGCGCCGGAGATCTTTGTCGATGGAGGAAATATCTCCTGCACAAGTTGTTGCTGACAGCCTGACTGAAATTGCTTATGGTAGAAATAGTAAAGACAACATTTCAATAATAGTTGTTGATCTAAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTGGTTTCCTGA 1191 0.5155 MEEDDQLERFDSEFASTSSGSGISSILSTEDFRNLTSSGDISSISSGSGEIPPVAVTEAVLVPPLLHRAGSNGDDGEPAMPPALREKCVGRSSKGVSWGHTSVIGRRREMEDALAVIPGFMSRTCDHVGGCAAPGSRSSGEISPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMAGGTEWQRRWEAVFANSFERTDNEILSDAVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTIPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTSRTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRSLSMEEISPAQVVADSLTEIAYGRNSKDNISIIVVDLKSKRKRQQRPPLVS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1382 396 ProSiteProfiles PPM-type phosphatase domain profile. 97 382 IPR001932 -
Apr2g1382 396 SMART PP2C_SIG_2 126 382 IPR001932 -
Apr2g1382 396 CDD PP2Cc 99 382 IPR001932 -
Apr2g1382 396 SUPERFAMILY PP2C-like 90 383 IPR036457 -
Apr2g1382 396 ProSitePatterns PPM-type phosphatase domain signature. 147 155 IPR000222 GO:0043169
Apr2g1382 396 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 45 391 - -
Apr2g1382 396 Pfam Protein phosphatase 2C 106 375 IPR001932 -
Apr2g1382 396 PANTHER ALPHABET, ISOFORM E-RELATED 45 391 - -
Apr2g1382 396 MobiDBLite consensus disorder prediction 1 23 - -
Apr2g1382 396 SMART PP2C_4 81 380 IPR001932 -
Apr2g1382 396 Gene3D - 87 392 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1382 Apr-Chr2 19930697 19938411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1382 98 392 PP2C-type Phosphatase Gene Family AT4G26080 50.794 2.62e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1382 K14497 - gmx:100793293 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1382 2 19930697 19938411 Apr2g1382 2 19930697 19938411 ECH