Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1374 ATGGGGAGGGCCACCAAGTGGTTGAAGAGCTTGTTTGGGATAAAGAGAGACAAAGAACCCAAAGAGAATTCAAATTCAAATTGTGGCACCAAATGGTGTCACTCTGAGAGAGATTCCAAAGGCTTATGTCACAATCCAGCCACCATACCACCCAATATTTCGCCTGCAGAGGCTGCTTGGCTACAATCCTTCTACTCAGAAACAGAGAAAGAGCAGAACAAGCATGCCATTGCAGTTGCAGCAGCCACCGCAGCTGCCGCAGACGCTGCAGTGGCTGCTGCTCAGGCTGCCGTGGCAGTGGTTAGGCTAACCAGCCATGGCAATGGCAGAGACGACAACATGTTTGGTGGGGGACAAGAGAGGTTGGCTGTTGTCAAGATTCAAACTGTGTTCAGAGGATACTTGGCAAGGAAGGCTTTGAGAGCCCTAAAAGGATTGGTGAAGTTACAAGCACTTGTGAGAGGGTACTTTGTGCGGAAGCAAGCAGCAGCAACACTGCATAGCATGCAGGCTCTAATTAGAGCTCAAGCAACAGTGAGGTCCAAGAAATCTCGTGGACTCACCAACACAAAAAATGAAGCACATAGGTTTCAAACACAAGCACGAAGAACCATGGAGAGGTTTGATGACACTAGGAGTGAGCACATAGCTGCCATACATAGTAGGAGGCTATCATCATCTTTTGATGCTACAATGAATAGTGTTGATGGGAGCCCAAAAATAGTGGAAGTGGACACAGGGAGGCCAAAGTCAAGGTCTCGTAGGAGTAACACCTCAATGTCAGATTTTGGCGATGACCCATCATTTCAAATATTTGCTTCTCCTCTTCCAATTCAATGTCGTACCCCAGCTCACTTATCCATACCAGACAACAGGAATTTCCACGACACAGATTGGGGCTTAACAGGAGAAGAGTGCATATTCTCAACAGCACATAGCACTCCACGCTTCACCAATTCTTGTAGTTGTGGGTCTGTTGTTGCAGCCGTGACACCTAAAAGTGTTTGCACTGATAACTTGTTGGTTGGGCAGTATGGTAGTTGTCCAAACTACATGGCCAACACTCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGCCCTGATCCGGGTCCAAAGAAGAGGCTTTCCCTGAATGAGATGATGGAGTCTAGAAGTAGTTTAAGTGGGCTTCGAATGCAAAGGTCTTGCTCTCAGATTCAAGAGGCTATTAATTTTAAGAATGCTGTTATGAGTAAGCTGGACAAGTCCACAGAACTTGGAAGGGAAACAGATAAGAGCTTCTACAACCAGAGGAGGTGGTGA 1317 0.467 MGRATKWLKSLFGIKRDKEPKENSNSNCGTKWCHSERDSKGLCHNPATIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGNGRDDNMFGGGQERLAVVKIQTVFRGYLARKALRALKGLVKLQALVRGYFVRKQAAATLHSMQALIRAQATVRSKKSRGLTNTKNEAHRFQTQARRTMERFDDTRSEHIAAIHSRRLSSSFDATMNSVDGSPKIVEVDTGRPKSRSRRSNTSMSDFGDDPSFQIFASPLPIQCRTPAHLSIPDNRNFHDTDWGLTGEECIFSTAHSTPRFTNSCSCGSVVAAVTPKSVCTDNLLVGQYGSCPNYMANTQSFKAKLRSHSAPKQRPDPGPKKRLSLNEMMESRSSLSGLRMQRSCSQIQEAINFKNAVMSKLDKSTELGRETDKSFYNQRRW* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1374 438 MobiDBLite consensus disorder prediction 236 265 - -
Apr2g1374 438 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Apr2g1374 438 MobiDBLite consensus disorder prediction 366 382 - -
Apr2g1374 438 Gene3D - 119 172 - -
Apr2g1374 438 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Apr2g1374 438 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Apr2g1374 438 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Apr2g1374 438 PANTHER IQ-DOMAIN 5-RELATED 1 422 - -
Apr2g1374 438 Pfam Protein of unknown function (DUF4005) 314 393 IPR025064 -
Apr2g1374 438 MobiDBLite consensus disorder prediction 360 382 - -
Apr2g1374 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 422 - -
Apr2g1374 438 SMART iq_5 142 163 IPR000048 GO:0005515
Apr2g1374 438 SMART iq_5 119 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1374 Apr-Chr2 19854829 19856453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1374 1 397 IQD Protein Family AT3G16490 51.471 9.08e-95 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1374 2 19854829 19856453 Apr2g1374 2 19854829 19856453 ECH