Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1362 ATGAACAAGATCAGCAACTTGAGTTGTGTTAGAAGCTCTGATCTCATAGATGCCAAGCTCGAAGAGCATCAGCTATGTGGATCCAAACAGTGCCCTGGTTGTGGACACAAGTTTGAAGGGAAGCCGCAGGACTGGCTAGGTCTACCAGCGGGAGTGAAGTTTGATCCAACAGACCAAGAACTCATAGAACATCTTGAAGCAAAAGTAGAGGCAAAGAATATGAAATCACACCCTTTGATAGACGAGTTCATCCCTACCATTGAAGGAGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTGACAAGAGATGGCCTAAGCAGACACTTCTTCCACAGGCCTTCAAAGGCTTACACAACAGGAACACGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGGGGAGAAACCCGATGGCACAAGACTGGTAAGACCAGGCCAGTGCTGGTGAATGGTAAACAAAAGGGGTGCAAGAAAATTCTGGTCCTTTACACCAATTTTGGGAAGAACAGAAAACCCGAGAAGACCAATTGGGTGATGCACCAATACCATCTTGGTCAGCATGAAGAAGAGAAAGAAGGAGAACTTGTGGTGTCAAAAATATTCTACCAAACACAACCAAGGCAATGCAATTGGTCAGATAGAAGTGCAACAACCGGTGAAGCAAGTGGAGAACAACCTAATAATGGAAGAAGAGACAGTGGAAGTGGAAGTTGTTCTTCAAAGGAAATCGTTACTCACAGAGATGAAATGTCTCCTGTTAATCTTGGGGTCCCTTCAATGACACCTTTCACCAATGCCTTGGATATTCACCACCTGAAATCTAACCATTTCAGCTTCGTTCCATTCAGAAAAAGCTTCGATGAGGTTGGAATGGGAGAAGCTTCCACGGGAAGTGAAGTGCAAGCATCAGGCTCATGCGAAGAAGTACATGAACGGCATGTAGCACATCATCATCATCAACAACAACAAAATCAGCATGCGCACCAACACATTGCAACCACAGCCTTCCATATCAGTAGGCCTTCGCTTCCCATCTCCACCATCATCGCTCCTCCTCCCCTTCACCACGCATCCATTATCCTAGACGACAACTCTTACCATGTCTCTAGAATAATGGAAAATTTCCAGCAACAGCAGCAACAACATCATAAACTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGGTGCACTTCAACTGATATCAAAGAGGAATCATCTATTACAAACCCACAAGAAGCGGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCCTGGGAACCTACATGATCATCATGAGTAG 1332 0.4512 MNKISNLSCVRSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPQDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVLVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEASGEQPNNGRRDSGSGSCSSKEIVTHRDEMSPVNLGVPSMTPFTNALDIHHLKSNHFSFVPFRKSFDEVGMGEASTGSEVQASGSCEEVHERHVAHHHHQQQQNQHAHQHIATTAFHISRPSLPISTIIAPPPLHHASIILDDNSYHVSRIMENFQQQQQQHHKLGGRSASGLEELIMGCTSTDIKEESSITNPQEAEWLKYSSYWPDPGNLHDHHE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1362 443 Gene3D NAC domain 57 213 IPR036093 GO:0003677|GO:0006355
Apr2g1362 443 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 422 IPR044799 GO:0003700
Apr2g1362 443 MobiDBLite consensus disorder prediction 216 247 - -
Apr2g1362 443 ProSiteProfiles NAC domain profile. 48 209 IPR003441 GO:0003677|GO:0006355
Apr2g1362 443 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 422 - -
Apr2g1362 443 MobiDBLite consensus disorder prediction 216 253 - -
Apr2g1362 443 Pfam No apical meristem (NAM) protein 49 190 IPR003441 GO:0003677|GO:0006355
Apr2g1362 443 SUPERFAMILY NAC domain 41 209 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1362 Apr-Chr2 19756671 19762844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1362 14 432 NAC Transcription Factor Family AT5G56620 55.034 2.13e-137 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g1362 NAM 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1362 - - gmx:100794811 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1362 2 19756671 19762844 Apr2g1362 2 19756671 19762844 ECH