Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1351 ATGGTTGAGAAGGGCAAGGGTAGGAAGGAGGAGGTCGTTACCCGTGAGTACACTATCAACCTGCACAAACGCTTGCATGGCTGTACATTTAAGAAGAAAGCTCCTAAAGCAATTAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGGACCAATGACGTGAGAGTGGATGTAAAGTTGAACAAGAATGTCTGGAGCCAGGGGATCCGAAGTGTCCCAAGGAGGATTAGGGTTCGCATTGCTCGCAAGAGGAATGATGATGAGGATGCAAAAGAAGAGCTATACTCTCTTGTTACTGTTGTTGAAATCCCTAAGGAAGAGCTCAAAGTGTTTTGA 336 0.4583 MVEKGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKNVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKVF* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1351 111 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Apr2g1351 111 Gene3D - 2 110 IPR023621 -
Apr2g1351 111 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Apr2g1351 111 PANTHER 60S RIBOSOMAL PROTEIN L31 1 109 IPR000054 GO:0003735|GO:0005840|GO:0006412
Apr2g1351 111 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Apr2g1351 111 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 109 - -
Apr2g1351 111 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1351 Apr-Chr2 19656108 19658922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1351 2 108 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 84.112 7.33e-63 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1351 K02910 - gmx:100306335 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1351 2 19656108 19658922 Apr2g1351 2 19656108 19658922 ECH