Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1348 ATGGGGAGAAGGATTCTGAATGATGCTTTGAGGAGTATGGTGAATGCAGAGAGGAGAGGGAAAGCTACGGTGGAGCTCAACCCCATCTCCGGTGTTATCTCTTCCTTTCTTAGCATCATGAAACACCGAGGATATATCAAGGATTTTCAAGTGTATGATCCGCATAGAGTGGGGAGAATAACAGTGGAATTACAAGGTAGGATTAATGATTGCAAGGCCCTTACGCATCGACAAGACATCAAGGCAAGGGATATTGAAACCTACAGATTGCATACTCTTCCAACACATCAGGTTCTCCTTCTCTCTTTGCAGTGGGGTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATTAGAAGAAATGTAGAAGAAATATAG 393 0.43 MGRRILNDALRSMVNAERRGKATVELNPISGVISSFLSIMKHRGYIKDFQVYDPHRVGRITVELQGRINDCKALTHRQDIKARDIETYRLHTLPTHQVLLLSLQWGYVVITTPDGVLDHEEAIRRNVEEI* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1348 130 SUPERFAMILY Ribosomal protein S8 3 127 IPR035987 GO:0003735|GO:0005840|GO:0006412
Apr2g1348 130 Gene3D - 2 68 - -
Apr2g1348 130 ProSitePatterns Ribosomal protein S8 signature. 106 123 IPR000630 GO:0003735|GO:0005840|GO:0006412
Apr2g1348 130 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 128 - -
Apr2g1348 130 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Apr2g1348 130 Gene3D - 69 129 - -
Apr2g1348 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 128 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1348 Apr-Chr2 19638162 19639134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1348 1 127 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 75.591 2.01e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1348 K02957 - zju:107419531 213.772