Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1347 ATGACCTCTAATCCAGTAATACTCCAGAGTCAGAACTTGACCAAGTATATACTGGAGACCAGCGTTTACCCACGAGAAGCAGAAGTTCTCAAAGAGCTAAGGAATGCCACTGCTAGCCACCCTTGGGGCTTCATGGGTGCTGCACCTGATGCGGGTCAATTAATGGCCTTACTCTTGAAGCTATTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCTGCACCGCACTTGCCATTCCCGATGATGGAAAGATTATAGCCTTGGATCCAGACAGAGAAGCTTATGAGATAGGACTACCATTCATCAAAAAGGCCGGTGTAGAACACAAGATTGACTTTGTAGAGTCTCCAGCTTTACCGGTTCTTGATAAACTCTTAGAAGATCCATCAAATAAGGGAACTTTTGACTTTGCCTTCGTTGATGCTGACAAAGGAAACTATTGGAATTACCACGAGCGGCTTCTTGAACTGGTCAAAATTGGTGGGTTAATTATCTATGATAATACCCTCTGGGGTGGAACCGTTGCCTGGGCTGAAGAGGATGTTCCACAACCCAAACGAAGAATAAGGCAGGATGCACTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTCTTGCTTCAATAGGCGATGGGCTCACTATTTGCCGCCGTGCTCATTGA 693 0.443 MTSNPVILQSQNLTKYILETSVYPREAEVLKELRNATASHPWGFMGAAPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLCTALAIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFVESPALPVLDKLLEDPSNKGTFDFAFVDADKGNYWNYHERLLELVKIGGLIIYDNTLWGGTVAWAEEDVPQPKRRIRQDALAFNKAIADDSRVEISLASIGDGLTICRRAH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1347 230 CDD AdoMet_MTases 68 172 - -
Apr2g1347 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Apr2g1347 230 PANTHER O-METHYLTRANSFERASE-RELATED 2 230 - -
Apr2g1347 230 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 2 230 - -
Apr2g1347 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Apr2g1347 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Apr2g1347 230 Pfam O-methyltransferase 19 228 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1347 Apr-Chr2 19633401 19636006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1347 7 230 Monolignol Biosynthesis Gene Families AT4G26220 64.732 4.78e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1347 K00588 - gmx:100780516 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1347 2 19633401 19636006 Apr2g1347 2 19633401 19636006 ECH