Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1338 ATGAATAGCCAAAAGGGTCGTTATGAAGAAGAGATGGGTACCTCAGAGGGGACCGGTAGAGTGGTCGTGGTTGCAGTTAAGGCTTCCAGAGATATTTCAAAGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTATTGGTTGTTATTCCGGCTCACTCAGCAAGCAAGAGGGTATGGGGACTTTCAAGATTTACTACTGATTGTACCACTAGTCACTGGAGATCCAGTTTAGGAACTGTTTCAGATCAGAAAGAAGTTATTTCAAATTCCTGTTCTCAATTAGTGCTTCAACTTCATGATTTTTATGATCCAGAGAAGATAAAGATTAGAGTGAAGATTCTTTCTGGGTCTTTATGCGGAGCAGTGGCTGCTGAAGCCAAGAGAGTCCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAACATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTCGCCCAAAGATTCTGCGTTTGAATTTGAATAGTTCGCCAAAGATGGATCTCAAAAGGGGTTGTTCATTGACACTGGAGCCAAATGCGTATACAAGAAACTTAAAAAACAAATGTGAATATCCAGATAGAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCCGAGCAAGGGTCACCACTATTGACTGCAACAGATATTGGAACATCATCAATATCAAGCTCAGATCCTGGGACTTCACCATTTTTCCACCCCAACAATTATGAAAGACAAAGGAGAAGTTTTCCCTTTGTTCATGAGGGACTGACAAACCTGGAGGATATTGAATCTGATTCAGAGAGTGAAAAGTTAAGTATATCATCCAAAAGTTCATATTTTCAGCCATGGATTGCAAATGTAATATGCATAGATGGTGATTTCTCAAAACATGAGGACAATATGCAAAGATCCAGTGACAAGACTTTGGTTTCTACCTATGATACATTGCTTCAGAAATTCTCAAAGTTAGATCAAGATCCTATCTTAGGAATGCTTAATTGTAAAATTGATGTGAACTTAAGCAAGAGTGTTAGAGAAGCAATTTCACTAGCTAAAAGTTCACCACCTGGACCTCCCCCGTTGTGCTCTGTTTGTCAGCACAAAGCACCTGTATTTGGGAATCCACCGAGGTGGTTTACATTTGCCGAATTGCAACTTGCTACTGGTGGTTTTTCGCAAGCAAACTTCTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGTGGTGTTCTACCTGATGGACAGGTCATAGCTGTTAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGCTGCGCACAACATCGTAATGTTGTGATGCTAATTGGTTTCTGTGTGGAGGATGGAAGAAGATTGCTAGTTTATGAATATATCTGCCACGGATCATTGGATTCTCATCTGTATGGACGAAAGCAGAATGTACTGGAATGGTCTGCACGGCAAAAAATCGCAGTTGGAGCAGCTCGTGGTTTGAGATATCTTCATGAAGAATGTAGAGTGGGCTGTATTGTGCACCGTGACATGCGACCTAACAATATCCTCCTTACTCATGATTTTGAAGCTTTAGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGATGGAGATATGGGTGTGGAAACCAGGGTGATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCATTTGGAATAGTATTGCTGGAGCTTGTTACAGGAAGAAAAGCAGTGGATATAAACCGGCCCAAGGGCCAACAATGCCTAAGTGAATGGGCGCGCCCATTGCTTGAAAAACATGCCATTCATAAGCTAGTAGATCCGAGCTTAAGGAACTGCTATGTTGATCAAGAGGTTTATCGCATGCTGCAATGCTCCTCTTTGTGCATCGGACGGGATCCTCATTTAAGGCCTCGAATGTCTCAGGTGCTCAGGATGCTGGAAGGTGACATTCTCATGTGA 2049 0.4197 MNSQKGRYEEEMGTSEGTGRVVVVAVKASRDISKTALVWALTHVVQPGDCIKLLVVIPAHSASKRVWGLSRFTTDCTTSHWRSSLGTVSDQKEVISNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSPKMDLKRGCSLTLEPNAYTRNLKNKCEYPDRIRGPAVTPASSPEQGSPLLTATDIGTSSISSSDPGTSPFFHPNNYERQRRSFPFVHEGLTNLEDIESDSESEKLSISSKSSYFQPWIANVICIDGDFSKHEDNMQRSSDKTLVSTYDTLLQKFSKLDQDPILGMLNCKIDVNLSKSVREAISLAKSSPPGPPPLCSVCQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICHGSLDSHLYGRKQNVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEKHAIHKLVDPSLRNCYVDQEVYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILM* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1338 682 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1338 682 MobiDBLite consensus disorder prediction 221 255 - -
Apr2g1338 682 SUPERFAMILY Protein kinase-like (PK-like) 386 677 IPR011009 -
Apr2g1338 682 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Apr2g1338 682 MobiDBLite consensus disorder prediction 214 255 - -
Apr2g1338 682 PANTHER OS01G0253100 PROTEIN 17 682 IPR045271 GO:0004714|GO:0006468
Apr2g1338 682 Gene3D Transferase(Phosphotransferase) domain 1 483 680 - -
Apr2g1338 682 CDD STKc_IRAK 412 678 - -
Apr2g1338 682 Pfam Protein tyrosine and serine/threonine kinase 410 675 IPR001245 GO:0004672|GO:0006468
Apr2g1338 682 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 682 - -
Apr2g1338 682 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1338 Apr-Chr2 19558316 19563322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1338 365 672 Trihelix Transcription Factor Family AT1G68690 50.799 3.40e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Apr2g1338 PK_Tyr_Ser-Thr 6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1338 - - aprc:113855006 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1338 2 19558316 19563322 Apr2g1338 2 19558316 19563322 ECH