Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1337 ATGGGGAGGAAGTGCTCACATTGTGGAAACATAGGGCATAATTCGAGGACCTGCACTTCTTTGAGAGGCACTAATTTCGTTGGACTTCGCCTCTTCGGCGTGCAACTTGACACTATCAAGAAAAGCTTTAGCATGGACTCCTTACCCTCTTCATTTTCTCCATCAAGAATATCCATTGATGATTCATCCTCTTTTGGGTATCTATCAGATGGTCTCATAGGTCGAGCCCAAGAGAGAAAGAAAGGAGTTCCATGGACAGAAGACGAGCACAGAATATTCCTTATTGGACTTGAGAAGCTGGGAAAAGGAGACTGGAGGGGTATCTCAAGAAACTTTGTGACCACAAGAACCCCAACACAAGTAGCAAGCCATGCTCAAAAGTACTTTCTTCGACTTGCAACTATAAATAAGAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTTGGTAGCAACAATCCCAACGTAGCAGGTCATAATCCAATTATTAACTGTTGTAATTCAGTTTCGGGTCAAGAGAATAAGCCTAAATATGAAGTTAAGAATGATGCCACTTTGTCGTTGCTAGGGCACATAACCTACTTTCAACAAGAAACCAAATCAGATCATAAGCAAGACACTTTGGATAATTACTCTCATCACTATCATCAAGTTCAACAAGCTGCAGAACATCAAGGAGTTCCTAATCTGGAGCTCACTCTTGCAGCCCCCAAGGCAAAGGCCCTGCAGGAACAAAATAAATCATCCCCTGCTGGTCCATTTCTGCTTGGGCCAATTAGCGTGACTTAA 786 0.4288 MGRKCSHCGNIGHNSRTCTSLRGTNFVGLRLFGVQLDTIKKSFSMDSLPSSFSPSRISIDDSSSFGYLSDGLIGRAQERKKGVPWTEDEHRIFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDLVGSNNPNVAGHNPIINCCNSVSGQENKPKYEVKNDATLSLLGHITYFQQETKSDHKQDTLDNYSHHYHQVQQAAEHQGVPNLELTLAAPKAKALQEQNKSSPAGPFLLGPISVT* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1337 261 CDD SANT 84 129 IPR001005 -
Apr2g1337 261 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 254 - -
Apr2g1337 261 Gene3D - 83 136 - -
Apr2g1337 261 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 131 IPR006447 GO:0003677
Apr2g1337 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 133 IPR017930 -
Apr2g1337 261 PANTHER TRANSCRIPTION FACTOR KUA1 1 254 - -
Apr2g1337 261 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Apr2g1337 261 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Apr2g1337 261 ProSiteProfiles Myb-like domain profile. 77 129 IPR001005 -
Apr2g1337 261 MobiDBLite consensus disorder prediction 240 261 - -
Apr2g1337 261 ProSiteProfiles SANT domain profile. 85 133 IPR017884 -
Apr2g1337 261 SUPERFAMILY Homeodomain-like 78 133 IPR009057 -
Apr2g1337 261 SMART sant 81 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1337 Apr-Chr2 19548067 19549697 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr2g1337 Myb_DNA-binding 4.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1337 - - gmx:778093 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1337 2 19548067 19549697 Apr2g1337 2 19548067 19549697 ECH