Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1326 ATGGAACGCTATGACAAGTGCAGAACGCAGAGGGAGAAGGGGGAAAACGGAGTGATAGTAGCGTCGTGTGGTTCTTCGCGCGAAAAATTCCGCAGTTATGGTGGGAAAACACTTTCGGCGATCGCTGCTTCTAGAAACGGTTCTTCATCTTCAAGATATATGGCGGCGACCGGTAATGTTAAGAAAAGGCAGAAACGAAAATGTCTTCAGGAGTTGTTTACTGCAGACTACATTGTCAACAACGTGCTGCGGAAGGATGGCCCTACTCTCGGCCAGGAATTTGATTCTCTTCCTTCTGGACCCAAATATTTCACTTTTGCATGTGAAGAGGACCAAGAATCTACGAAAAGAAGAAAGGTTTCCAAGAGTGCAATTCGAAGGCAACCCAATTGTAATATGAAAGCACCTGTGAAGAAACATGGTATTGGCAAAGGTCTGATGACAGTTTGGAGGGCAACAAATCCTGATGCTGCAGACCTTCCAATTGGTTTTGGCGTTGCTGACCAAGATGTTTCGCTAATCGCAAATTCTATGACACAGAAACAAGTCTGTGAGAACAGGTCATTGAAAACAGTGAGCTTGAATGGAATGCAAAAAAATAAAATGCAGAATAAGAGAACTCAGTTGAAGGATAAGAGGAAACTTGCCTTGCAAAGAAGAGTGGGGGAATTGAACATACATGTGACTCAGAATCAGACACCGAAGGAAAAATGTGAACTTGCTTTAGATAATGCAATATCAGATGAGGGAGTTGATCGAATTTCAATGTTAATTGATGATGAAGAGCTAGAGCTTAGAGAGTTACAAGGAGACAATCTGCTGATGTGTTCTGATCATCTTGCTGCCAGTGGAATGTTTGGCTGCTCACTTTGTAAAGATGTGCTGGCTAAGTTCCCCCCAGATAATGTCAAGATGAAGAAACCTATCCATTTGCAACCTTGGGACTCCTCTCCAGAAATTGTGAAGAAATTATTTAAGGTTTTCCATTTCATTTATACATATGCTACAGTTCTTGATATTTGTTCCTTCACTCTTGATGAGTTTGTTCAAGCATTTCATGATAAGGACTCAATGTTACTTGGGAAGATTCATGTGGCCCTTCTCACACTTCTTCTATCTGACATTGAAGTGGAGCTTGCTAATGAGTTTTCAGCTCATTTAAATAAGTCATGTAACTTTCTTGCATTGCTTCACTCGGTTGAAAGTCAAGAATATTCCCTGGACTTCTGGAGAAGATCTCTAAATCCTCTTACTTGGATTGAAATACTCCGTCAAGTGCTGATTGCCTCTGGATTTGGTTCAAAGCAAGGTTCCTTACGTAGAGAGGCCCTTAGCAAGGAATTGAATCTTATTGTAAACTATGGCCTATGCCCTGGCACATTGAAGAGTGAGTTGTTTAAAATCTTGTCAGAGAGAGGAAACAATGGATGCAAAGTATCTGAGCTGGCAAAGTCAAAGCAGATTGCTGAATTAAACCTTGCCAGCACAACAGAGGAACTGGAGTCTTTAATATGTTCTACACTTTCCAGTGATATTACTTTATTTGAGAAGATTTCGTCAACTGCATATCGATTGCGTATGAGCACTGTTACAAAGGACAGTGATGAATTTCAGTCAGACATGGAGGACTCTGGGAGTGTTGATGATGAACTTAATGACACTGATACATGCAGCAGTGGTGATGATTTTGAAAATATTTCAATAAACGCCAGTATAAGAAAACTGAAGCGTGCAAACAGTCATAAAAATAAAAATAATACACTGAAAGTATACACTGAAATTGATGAGAGCCATCCAGGAGAAGTGTGGTTATTAGGACTGATGGAGGGTGAATATTCAGATTTGAATGTTGAGGAAAAATTAAATGCATTGGCAGCTTTGACTGATCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAAAAGTTACAGCTGATTGCAATTCTGGCATCCACTTACGTGGTTCTGGAGCTAAAATAAAGAGATCAGTAGTAAAAAATCCAGGGCCTTTTTGGAACCAGACTGGACAAATGCGATGTGTTCCAGAAGTACACTTGAATTCTGATCCCCGTCCAGTAGATTCCTCATCATTAATCTCTAGGTTCCATAGTCATGAGGCATCCATTGAAAAGGGAAAAGGTTCAACTGATTCACACCCGATTCAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATACTGGCTTTTCTTGGGCCCTTGTAACACAGATGATCCAGGCCACAGGAGGGTTTACTTTGAATCTTCCGAAGATGGTCACTGGGAGGTTATTGATACTGAAGAGGCCTTGTGTGCCTTGTTGTCAGTTCTGGATGATAGAGGGAAACGGGAGGCTCTTCTTATTGAATCTTTGGAAAGGAGACAGATATCTCTATGTAGATCTATGTCCAGGATTAATGTTAATAGTACTGGAATAGGGTGTTTGTCACAATCTGATCAATCTGAATTGGATATGGTCACAGATGACAGTTATTCTCCTGTATCTGATGTAGACAACCTAAACCTGACTGAGACTGGTAAAGACTCTTTACCATCAGCTGGGGCTGTGGTAATTGAAGCAGGAAAGAGAGGAGAGGAACAAATGCAAAAATGGATCCGTGTTCAAGAATATGATTCCTGGATTTGGAATTCCTTTTATTTAGACCTCAATGTTGTGAAATATGGTAGAAGGTCTTATCTTGACTCTCTTGCCAGATGTAAGAGTTGTCATGATCTGTACTGGAGAGATGAGAGACACTGTAAAATTTGCCATGTGACTTTTGAGCTTGATTTTGATCTAGAAGAAAGATATGCAATCCACATTGCCACATGCAGGGAGAAAGAAGATAGAAATACATTTCCTAATCATAAGGTGCTACCATCACAGATTCAATCACTAAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCCGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAAACTATGGGTCAAACGGCTCAGACGTACCTCAACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCATCAATGAGGACTGGTTGTTTCAATGCAAATTTCCAGATGGTGTGGTTGAAGAAATCATTGCATCTTTTGCATCTATGCCCCATACATCATCTGCCCTTGCTCTGTGGTTAGTGAAGTTAGATGCCATAATTGCTCCCTACCTGGACAGAGTCCATCCTCAGAAGAAGCAGGGAATCAGCAAACATGGTTCTTGGTGA 3255 0.4101 MERYDKCRTQREKGENGVIVASCGSSREKFRSYGGKTLSAIAASRNGSSSSRYMAATGNVKKRQKRKCLQELFTADYIVNNVLRKDGPTLGQEFDSLPSGPKYFTFACEEDQESTKRRKVSKSAIRRQPNCNMKAPVKKHGIGKGLMTVWRATNPDAADLPIGFGVADQDVSLIANSMTQKQVCENRSLKTVSLNGMQKNKMQNKRTQLKDKRKLALQRRVGELNIHVTQNQTPKEKCELALDNAISDEGVDRISMLIDDEELELRELQGDNLLMCSDHLAASGMFGCSLCKDVLAKFPPDNVKMKKPIHLQPWDSSPEIVKKLFKVFHFIYTYATVLDICSFTLDEFVQAFHDKDSMLLGKIHVALLTLLLSDIEVELANEFSAHLNKSCNFLALLHSVESQEYSLDFWRRSLNPLTWIEILRQVLIASGFGSKQGSLRREALSKELNLIVNYGLCPGTLKSELFKILSERGNNGCKVSELAKSKQIAELNLASTTEELESLICSTLSSDITLFEKISSTAYRLRMSTVTKDSDEFQSDMEDSGSVDDELNDTDTCSSGDDFENISINASIRKLKRANSHKNKNNTLKVYTEIDESHPGEVWLLGLMEGEYSDLNVEEKLNALAALTDLLSSGSSIRMKDPKVTADCNSGIHLRGSGAKIKRSVVKNPGPFWNQTGQMRCVPEVHLNSDPRPVDSSSLISRFHSHEASIEKGKGSTDSHPIQSVFLGSDRRYNRYWLFLGPCNTDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQISLCRSMSRINVNSTGIGCLSQSDQSELDMVTDDSYSPVSDVDNLNLTETGKDSLPSAGAVVIEAGKRGEEQMQKWIRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLARCKSCHDLYWRDERHCKICHVTFELDFDLEERYAIHIATCREKEDRNTFPNHKVLPSQIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINEDWLFQCKFPDGVVEEIIASFASMPHTSSALALWLVKLDAIIAPYLDRVHPQKKQGISKHGSW* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1326 1084 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 599 638 IPR028942 -
Apr2g1326 1084 SMART testlast3 318 377 IPR018501 -
Apr2g1326 1084 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 723 796 IPR028941 -
Apr2g1326 1084 Coils Coil 251 271 - -
Apr2g1326 1084 ProSiteProfiles DDT domain profile. 318 377 IPR018501 -
Apr2g1326 1084 Coils Coil 199 219 - -
Apr2g1326 1084 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 8 1076 IPR044977 GO:0006357
Apr2g1326 1084 MobiDBLite consensus disorder prediction 534 553 - -
Apr2g1326 1084 PANTHER OS07G0619600 PROTEIN 8 1076 - -
Apr2g1326 1084 Pfam DDT domain 321 374 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1326 Apr-Chr2 19441674 19450925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1326 239 1078 Homeobox Transcription Factor Family AT1G28420 26.321 3.86e-75 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Apr2g1326 WSD 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1326 - - aprc:113853612 2170.97