Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1321 ATGGCAAGGTTGGTTCAAGAGAAGAAGCTAGGTGCAGGCCGTGTGGTGGCCGTGGCAATTGAGAATAACAAAGCAAGCCAATATGCAGCTAAATGGGCAGTTGACAATCTTCTTCCCAAAGACCAAGCTCTCTTATTGGTCAATGTTAGACAAAAAGCATCTACCATTCCTACGCCAATGGGAAATCATATATCCCTTGATGGCAATGCTGATGTGGCTAGAGCATACATGCAACAAATGGACAACGAATCCAGGGCGCTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAAATTTTGTTGGAGGACACGGATATAACCAAGGGATTAATAGAAGGTATTTCCACATATTCCATTGAGATTTTGGTACTTGGGGCAGCATCAAGGAGTGGTCTTGTCAGAAAATTTAGAATATTCGATATTCCAAGTGCTGTGTCCAAAGGGGCGCCACCATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCTCATCAGTGCGGACCGCTACTGCTCCACTACCCCGTAACAATATAATGCAGTCTCAGCCTCTCCAAAATCCTGAGAGAATGGATACACAACTAATACGCAACCAACCACCACGATCATCAATAGAGAAGCCATCATACATTTCCCGCCAGTCAGTGGATGAAGAGGGAATCAAATCACCATTCACAAGACTTGGTAGAGTATCCAACAGATCATACGAGTCCTCAATCCCTGACTCAGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCATTGTATGATGATCTGGACTCTGGAATAAACCATCGGCTTTCATCAAGCTCGGATTTTGAGGTCAGAAGCTTTGGTTCTTCTTTCTCAGGACCTAAGTCAATTGATCCATGTGACTACTCGTTCAGCTCACAAGACAGTGGCATGTCGATGTCATCATCAAGGTTTTCAGCTTCGGATGAAATGGAAGCTGAAATGAGGAGATTGAGGCTAGAACTGCAGCAGACAATGGATATGTACAGTACAGCTTGCAAGGAAGCTATGACAGCAAAGCAAAAGGCACTGGATCTTCAGCGTTGGAAATTGGAAGAACAAAGGAAATTGGAAGAGGCGCGAATAGCTGAAGAAACAGCATTGGCGATAGCTCAGACAGAGAAAGCAAAATATAGAGCTGCCATGGAAGCAGCACAAGCATCTCGAAGAATTGCAGAGTTGGAGGCACAAAAGAGAATTAGTATAGAATCTGAGCAGAAGAATAAGACAGTGGATGTCATGGGACATAGTCCTGCCATGTACAGAAAATACACAATTGAGGAAATAGAAGAAGCCACAAATTTCTTTTCCAACTCTCTCAAGATTGGTGAAGGAGGATACGGGCCAGTCTACAGGTGTGAACTAGATCATACGCCAGTTGCAATAAAAGTGTTAAAACCAGATGCAGCTCAGGGAAGGTCACAGTTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTTCTTGGAGCATGCCCAGAGTATGGTTGCTTAGTGTACGAGTACATGGCTAATGGAAGTCTGGATGATTGCCTCTTCCGGAGGAATAACAAGCCAGCTCTTTCCTGGCAGCTAAGATTCCGAATTGCTGCAGAGATTGCTACTGGGCTTCTTTTCCTACACCAAACAAAACCAGAACCCCTGGTGCATCGTGACTTGAAACCAGGAAACATTTTGCTTGACCGTAACTTTGTGAGCAAGATCAGTGATGTGGGGTTGGCCAGGCTTGTACCTCCTTCAGTTGCAGACACTGTGACACAATATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTACCAGCAAACGGGCATGCTGGGGATCAAATCTGATGTTTACTCACTGGGGATCATGCTTCTACAGATTGTAACAGCCAAATCACCGATGGGTTTGACTCATCATGTTGGAAGAGCCATTGAGAACGGGACTTTTGCTGAGATGCTTGACCCTGCTGTTGAAGACTGGCCATATGAACATGCCTTGCATTTTGCCAAACTTGCTTTGATGTGTGCAGAAATGAGAAGAAAAGATAGGCCTGATCTAGGCAAAGTTGTATTACCTGAGCTCAATAAACTCAGAGATTATGCTGAAGACAACATGCCCATGATGATGTTCGGCGGCCCCCCAGCATTCACTCCCAGAAGCAACTACAATTACTCAAGCTCCACATTTTCCTCAGTTCAAGACACAATGAGTGAGTCCCAGTCGATGTCTGGAATATCCGAATACGAAAGCCGATCAAGCACATCATCAATGGGCAAAATGTGA 2346 0.4446 MARLVQEKKLGAGRVVAVAIENNKASQYAAKWAVDNLLPKDQALLLVNVRQKASTIPTPMGNHISLDGNADVARAYMQQMDNESRALFASFRVFCNRKSIQCKEILLEDTDITKGLIEGISTYSIEILVLGAASRSGLVRKFRIFDIPSAVSKGAPPFCTVYIISKGKISSVRTATAPLPRNNIMQSQPLQNPERMDTQLIRNQPPRSSIEKPSYISRQSVDEEGIKSPFTRLGRVSNRSYESSIPDSDISFVSSGRPSVDRMFPSLYDDLDSGINHRLSSSSDFEVRSFGSSFSGPKSIDPCDYSFSSQDSGMSMSSSRFSASDEMEAEMRRLRLELQQTMDMYSTACKEAMTAKQKALDLQRWKLEEQRKLEEARIAEETALAIAQTEKAKYRAAMEAAQASRRIAELEAQKRISIESEQKNKTVDVMGHSPAMYRKYTIEEIEEATNFFSNSLKIGEGGYGPVYRCELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRNNKPALSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQIVTAKSPMGLTHHVGRAIENGTFAEMLDPAVEDWPYEHALHFAKLALMCAEMRRKDRPDLGKVVLPELNKLRDYAEDNMPMMMFGGPPAFTPRSNYNYSSSTFSSVQDTMSESQSMSGISEYESRSSTSSMGKM* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1321 781 PANTHER OS02G0152300 PROTEIN 1 780 - -
Apr2g1321 781 Coils Coil 384 413 - -
Apr2g1321 781 Gene3D HUPs 14 162 IPR014729 -
Apr2g1321 781 SMART serkin_6 452 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1321 781 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 780 - -
Apr2g1321 781 Pfam Protein tyrosine and serine/threonine kinase 457 710 IPR001245 GO:0004672|GO:0006468
Apr2g1321 781 Gene3D Transferase(Phosphotransferase) domain 1 525 729 - -
Apr2g1321 781 MobiDBLite consensus disorder prediction 754 781 - -
Apr2g1321 781 Gene3D Phosphorylase Kinase; domain 1 430 524 - -
Apr2g1321 781 ProSiteProfiles Protein kinase domain profile. 452 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1321 781 CDD STK_N 15 167 - -
Apr2g1321 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Apr2g1321 781 Coils Coil 324 344 - -
Apr2g1321 781 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 142 - -
Apr2g1321 781 SUPERFAMILY Protein kinase-like (PK-like) 430 711 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1321 Apr-Chr2 19390921 19395443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1321 7 742 Receptor kinase-like Gene Family AT1G78940 55.541 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr2g1321 PK_Tyr_Ser-Thr 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1321 - - gmx:100803837 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1321 2 19390921 19395443 Apr2g1321 2 19390921 19395443 ECH
Apr2g1321 2 19390921 19395443 Apr6g1237 6 16827951 16831719 PCT