Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1308 ATGGCGTTGACGCCGTCAACGGCTCTCGTTTCCTTCCTTGAACGTCTCCAAGAAACCGCATTCGAAACCTTCGGTGACTCTAACTTCGATCCAAAGACCTACATGGACCTGCCTCTCAGGTTCACACTCGCCGTAACGGAACACGCGTTCCAGAACCTTCCAAGGACCGCTAACGGTTCCGTGTCGGTTGAGGAGTTGAACCGTTTTCTAGAAGCGCACTTCGAGGGTGCAGGGGATGATCTGGTGTACCACGAACCAGAGGATTTCGTTCCTCAGCCGAAGGGGTTTCTGGCGAAGGTGAAGCACCCTCAGGTGAGAGCGTGGGCGTTGGAGGTTCATTCGCTTTGGAAGAACTTGAGCAGGAAAGTATCCAGTGCGGTGAAGGTGCACCCGCAGTTGCATACTCTGCTTCCTCTCCCTGCTTCTTTAGTCATTCCTGGGTCGCGCTTTCGTGAGGTTTATTACTGGGATTCGTATTGGGTAATTAGAGGCTTGTTGGTGAGTAAAATGTATAAGACTGCTAAGGCTATTGTTACGAATCTCATTTCCTTCATTGAAGAATATGGTTTTGTGCTTAATGGTGCTAGAGCATACTATACCAACAGGAGCCAGCCTCCCCTCTTAAGTGCTATGATCTATGAGATATACTGTCACACGGGTGATATAGAATTAGTTAAAAGATCCCTCCCTGCACTATTGAAAGAGTATGAGTTTTGGAATTCAGACATACACAAAGTGACCATTTTGGATGCTCAAGGTTGCACTCACACTTTGAATCGTTATCATGCAATGTGGAACAAGCCCAGGCCAGAATCGTCCATAATGGACAAGGTATCTGCATCCAAATTCTCGAATGTTTCAGAAAAACAACATTTTTATCGTGATTTGGCATCAGCAGCTGAATCCGGATGGGATTTCAGCACTAGATGGATGAGAAACCCACCTGATTTCACAACAATAGCTACAACATCTGTAATTCCTGTTGATTTGAATACGTTTCTACTTGGGATGGAACTTAATATTGCCTTCTTTGCAAAAGTTACTGGTGATAATAGCACTGCCAAACACTTTGTGGAAACTTCTGATCTTAGAAAGAAGGCAATGAACTCTGTTTTCTGGAATCCAAACATGAAACAATGGCTTGATTACTGGCTCAGCAATAGCACTTGTCAGGAGGTTCAGGTTTGGAAAAACCTGCATCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGTTGAAGCCATTTCATTCAGATACTTCGCTTGTGGGTAGTGTTGTTGAAAGTCTCAAAGCTTCTGGCCTGCTTCGTGCTGCTGGAGTTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAACGGGTGGGCCCCACTTCAACATATGCTAGTGGAGGGCCTTCTAAAATCAGGGTTGAAAGAAGCAAGGTCATTGGCTGAGGACATTGCCATCAGATGGATCACAACAAATTATATTGTTTACAAAAAAACGGGTGTGATGCATGAAAAGTTTGACGTGGAGCATTGTGGAGAATTTGGAGGTGGGGGTGAATATGTATCCCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCAGCAGATCGGAATATAGAATGCTGA 1659 0.4497 MALTPSTALVSFLERLQETAFETFGDSNFDPKTYMDLPLRFTLAVTEHAFQNLPRTANGSVSVEELNRFLEAHFEGAGDDLVYHEPEDFVPQPKGFLAKVKHPQVRAWALEVHSLWKNLSRKVSSAVKVHPQLHTLLPLPASLVIPGSRFREVYYWDSYWVIRGLLVSKMYKTAKAIVTNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYCHTGDIELVKRSLPALLKEYEFWNSDIHKVTILDAQGCTHTLNRYHAMWNKPRPESSIMDKVSASKFSNVSEKQHFYRDLASAAESGWDFSTRWMRNPPDFTTIATTSVIPVDLNTFLLGMELNIAFFAKVTGDNSTAKHFVETSDLRKKAMNSVFWNPNMKQWLDYWLSNSTCQEVQVWKNLHQNQNVFASNFVPLWLKPFHSDTSLVGSVVESLKASGLLRAAGVATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLKEARSLAEDIAIRWITTNYIVYKKTGVMHEKFDVEHCGEFGGGGEYVSQTGFGWSNGVVLAFLEEFGWPADRNIEC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1308 552 PANTHER TREHALASE 9 552 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PANTHER TREHALASE 9 552 - -
Apr2g1308 552 ProSitePatterns Trehalase signature 2. 453 462 IPR018232 GO:0004555|GO:0005991
Apr2g1308 552 Gene3D - 17 549 IPR012341 GO:0005975
Apr2g1308 552 Pfam Trehalase 28 543 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 SUPERFAMILY Six-hairpin glycosidases 24 545 IPR008928 GO:0005975
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 188 206 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 258 275 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 293 310 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 325 342 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 368 384 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 446 462 IPR001661 GO:0004555|GO:0005991
Apr2g1308 552 PRINTS Glycosyl hydrolase family 37 signature 526 539 IPR001661 GO:0004555|GO:0005991
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1308 6 552 Trehalose Biosynthesis Gene Families AT4G24040 60.254 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1308 K01194 - gmx:547539 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1308 2 19251459 19256352 Apr2g1308 2 19251459 19256352 ECH