Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1290 ATGGACGATGCTGAAACCAAAGGAAGAATTGAGGTAACAGTTCGTAAGATATTGCAAGAATCAGACATGGACGAGGTTACTGAGTCGAAGATTCGAAAGCAAGCTTCCAACCAACTCGGCCTCGACCTATCTCAACCTCACTTCAAAGCCTTCGTGAAGCAGGTTGTGAAGGCTTTTCTCCAAGAGAAACAAGAAGAAGAACAACAACAAGACGAAGAAGAAGAGGAGCAGGGAGGTTCCAAGGACAAGGAGTACGATGATGATGGCGATCTCATCATCTGCAAGCTTTCAGAGAGGAGAAGGGTAACTATTCAGGATTTTAAAGGGAAAACATTGGTCTCCATTCGGGAGTTTTATAGAAAGGATGGCAAGGAACTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGTCGTCCTTCAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTAAGAAGATGGAGTCACGCAACATGTAA 486 0.4383 MDDAETKGRIEVTVRKILQESDMDEVTESKIRKQASNQLGLDLSQPHFKAFVKQVVKAFLQEKQEEEQQQDEEEEEQGGSKDKEYDDDGDLIICKLSERRRVTIQDFKGKTLVSIREFYRKDGKELPTSKGISLTEEQWSSFKKNVPAIEKAIKKMESRNM* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1290 161 MobiDBLite consensus disorder prediction 66 81 - -
Apr2g1290 161 Gene3D Transcriptional Coactivator Pc4; Chain A 83 159 IPR009044 GO:0003677|GO:0006355
Apr2g1290 161 PIRSF RNA_polymII_KELP 1 160 IPR017415 -
Apr2g1290 161 SUPERFAMILY ssDNA-binding transcriptional regulator domain 93 155 IPR009044 GO:0003677|GO:0006355
Apr2g1290 161 Gene3D - 3 63 - -
Apr2g1290 161 Coils Coil 56 77 - -
Apr2g1290 161 Pfam Transcriptional Coactivator p15 (PC4) 94 145 IPR003173 GO:0003677|GO:0006355
Apr2g1290 161 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 159 IPR045125 GO:0003713|GO:0060261
Apr2g1290 161 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 159 - -
Apr2g1290 161 MobiDBLite consensus disorder prediction 62 87 - -
Apr2g1290 161 SUPERFAMILY DEK C-terminal domain 5 61 - -
Apr2g1290 161 Pfam DEK C terminal domain 6 60 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1290 Apr-Chr2 19132928 19135163 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Apr2g1290 DEK_C 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1290 K25815 - gmx:100305633 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1290 2 19132928 19135163 Apr2g1290 2 19132928 19135163 ECH