Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1270 ATGAGTCGAGGGCCCCTATCTCCACAAGACCACAACTCCGCCTTCGTTGACACCTTTTGTCTCTCCTCCATTCACAAGCATTACGTCGATGATGGTGAGCATCCATCGCCCAATGGGCGAGAGAAGCAGAGAGTGAGGCTCACTCATGCAAGAGTAACCTCTACTCTTCCTTCATTCTACATATCATTCATCCTTTGCTCTTCCTTGGGAGAAAAAATCACCTCTCAAGTCGATGAAACAACGGAAGCAACGCAAGAAAGAAACGCAGAACATGCTGGTGTTGATAACGGGTCATGTTTATTATTATCAGACATGAACGGATCAAACACTCTCCACTCCACTTTCTCTCATTACCCCCCATCAAATTCCACTACTACTGTTACCAGCAGTTCTATGCCTTCAGGCTCTTTCGGGTGTTCAGTGTACCACCGCCAAAGAGATATTCTAGAAAAGTTGTATGAAGAAAGCAAGTTGAATGGTTCTTTAGTTCCCAATTCCTCGAAAAAAGGGTACAGGGGAGTGAGACAGAGACAGTGGGGAAAATGGGTGGCAGAGATTAGAGTTCCTCAGAACAGAATGAGGGTGTGGTTGGGCACTCACGACACTCCTGAAGCTGCAGCTTATGCGTACGATCGTGCCGCTTATAAACTCCGAGGTGAATACGCGCGTTTAAATTTCCCTCATGGATTTGGAGATGAATCCACGAGTTTGAGTGCTTTGAAGAGCTCAGTGGATGCTAAAATTCAAGCCATGTGTCAAACGATGAAGAGGGACAAGTCCAAGACTCGCGCTACCCAGAAGCTGTAA 807 0.4647 MSRGPLSPQDHNSAFVDTFCLSSIHKHYVDDGEHPSPNGREKQRVRLTHARVTSTLPSFYISFILCSSLGEKITSQVDETTEATQERNAEHAGVDNGSCLLLSDMNGSNTLHSTFSHYPPSNSTTTVTSSSMPSGSFGCSVYHRQRDILEKLYEESKLNGSLVPNSSKKGYRGVRQRQWGKWVAEIRVPQNRMRVWLGTHDTPEAAAYAYDRAAYKLRGEYARLNFPHGFGDESTSLSALKSSVDAKIQAMCQTMKRDKSKTRATQKL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1270 268 SMART rav1_2 170 233 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 Pfam AP2 domain 170 220 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 Gene3D AP2/ERF domain 170 228 IPR036955 GO:0003700|GO:0006355
Apr2g1270 268 ProSiteProfiles AP2/ERF domain profile. 170 227 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 95 266 - -
Apr2g1270 268 SUPERFAMILY DNA-binding domain 170 228 IPR016177 GO:0003677
Apr2g1270 268 CDD AP2 169 228 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 PRINTS Ethylene responsive element binding protein signature 171 182 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Apr2g1270 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 95 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1270 Apr-Chr2 18936864 18937802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1270 107 261 AP2-EREBP Transcription Factor Family AT1G64380 46.569 1.27e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr2g1270 AP2 4.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1270 - - aprc:113855756 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1270 2 18936864 18937802 Apr2g1270 2 18936864 18937802 ECH