Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1266 ATGGAGAATGAGTGGAACTGGGAGCAGAACACACTCATCAATGAGCTAATTCAGGGGATGGAGGTGGCAAGGAAGTTGAAGGCAGACTTGAGGGAACCGTATTCGGTTGAAACTAGAGATTTGCTGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTGCTTATTTTAAGATACAATGCATCAACTTCCAAGTTGCAGTCTATGAATCAAGCAACAGCAACTTTGTTACCAGAGTCCCCAATATCTGTCAATGAAAGTCCTCAGAGGGAAGATGTTGATGGGGTAAAAGAAATGAAGGATCACCAGGAAATTAAACACGATTCAAAGAAAAGAAAGATAATGCCCAAATGGATGGACCAAGTAAGAGTCAGCTGTGAGAGTGGTCTTGAAGGATCGCATGAAGATGGCTACAACTGGAGAAAATATGGTCAAAAAGACATCCTCGGTGCCAAATATCCCAGAAGTTACTACAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCCACAAAGCAAGTACAGAGATCAGATGAAGATCCCACCATCTTTGACATAACTTACAGAGGAAAGCATACCTGTTCTCAGGGAAACAATGCCATTCTGGCACCTGAGTCACCAGACAAACAAGAGAAAGCACAAAGTTATAATACTGATATTCACAATGCACATCCATCACAAGAAAACCTTACAAGGTTCAGAAACATCTTGGCTGTCGACACGAATAAACAGGAAAATGGAGAAATGGCATATCCTTTTACTTTCCCTTCAGCTTCATTTGGATGCATGACACAAGACAACCACAGCTTGATTCCTTCGGCCCTAGAGAACGAGTCCTTCTTGAGCAGCCTATACCAAACACACCTGTTAGCTCCAACAACACCAGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGAATGAGTTTGATGGGATCTATAACAAGCCACATTTGGAATCAGATATCAACGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCGATTCCCGATTTCAATTTCTCACTTGATCCAGCGGAAATTGATCCGAATTTCCCCTTTAATACCCCAGGATTTTTCTGCTGA 1092 0.4249 MENEWNWEQNTLINELIQGMEVARKLKADLREPYSVETRDLLVQRILSSYEKALLILRYNASTSKLQSMNQATATLLPESPISVNESPQREDVDGVKEMKDHQEIKHDSKKRKIMPKWMDQVRVSCESGLEGSHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAILAPESPDKQEKAQSYNTDIHNAHPSQENLTRFRNILAVDTNKQENGEMAYPFTFPSASFGCMTQDNHSLIPSALENESFLSSLYQTHLLAPTTPESNYFPSPTFQMNEFDGIYNKPHLESDINEIISTNTSATNSPIPDFNFSLDPAEIDPNFPFNTPGFFC* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1266 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 359 IPR044810 GO:0003700
Apr2g1266 363 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 359 - -
Apr2g1266 363 Gene3D WRKY domain 120 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g1266 363 MobiDBLite consensus disorder prediction 90 111 - -
Apr2g1266 363 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g1266 363 ProSiteProfiles WRKY domain profile. 129 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g1266 363 MobiDBLite consensus disorder prediction 82 111 - -
Apr2g1266 363 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g1266 363 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1266 Apr-Chr2 18886565 18888431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1266 6 355 WRKY Transcription Factor Family AT4G11070 38.095 5.99e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g1266 WRKY 8.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1266 - - gmx:100815760 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1266 2 18886565 18888431 Apr2g1266 2 18886565 18888431 ECH
Apr2g1266 2 18886565 18888431 Apr1g0705 1 8417409 8419187 ECH
Apr2g1266 2 18886565 18888431 Apr10g1234 10 24728958 24731797 ECH
Apr2g1266 2 18886565 18888431 Apr4g0912 4 7362135 7364807 ECH
Apr7g0532 7 11786912 11788258 Apr2g1266 2 18886565 18888431 PCT