Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1258 ATGGCCGTGAAAATGCATCTTAGTTTATTCATCTTTGCCACAATTGGCTGCATTATGTTGGTATCTGTGAGTTCAACAACAACTCACGTTGTTGGAGACAATTTTGGTTGGAATATGCCCAGCTACCCTGGTTTCTTCGAGGACTGGGCCAAGAAAAGAACCTTCAGTGTTGGTGACGTACTCCTTTTTCAGTACAACGCGGGGCTAAACACGGTGGTTGAGGTAAACAAAGAGGACTATGGTAACTGTACTACCAGAAATACTCTCAATTCGTTCTTCGAAGGGGACTCGAGTTTTATTTTGCGCAGGGCTGGGGATTATTATTTTTTATCTTCAGTTGGAAAACATTGTGAAGCTGGCCTAAAGCTTTGGGTTAACGTTCATCAGTAA 390 0.4256 MAVKMHLSLFIFATIGCIMLVSVSSTTTHVVGDNFGWNMPSYPGFFEDWAKKRTFSVGDVLLFQYNAGLNTVVEVNKEDYGNCTTRNTLNSFFEGDSSFILRRAGDYYFLSSVGKHCEAGLKLWVNVHQ* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1258 129 Pfam Plastocyanin-like domain 37 120 IPR003245 GO:0009055
Apr2g1258 129 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Apr2g1258 129 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Apr2g1258 129 Gene3D - 26 129 IPR008972 -
Apr2g1258 129 PANTHER BLUE COPPER PROTEIN 2 128 IPR039391 GO:0009055
Apr2g1258 129 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Apr2g1258 129 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1258 Apr-Chr2 18836074 18836668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1258 13 123 Phytocyanin Superfamily AT2G25060 38.053 5.53e-23 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1258 - - gmx:102660389 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1258 2 18836074 18836668 Apr2g1258 2 18836074 18836668 ECH