Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1256 ATGGAATTACTACGCATTTTGTCTTCCATTTGCTTCTTGTGTTTTATTCTCTGGCAAGGAAATGCTGAACCAGTTGAAGATAAGGAGGCTTTGCTTGATTTTGTGAAGAAGTTTCCTCCTTCTAGGCCTCTGAATTGGAATGAAAGTTCCCCCATGTGTTCTTCTTGGACTGGAGTGACTTGCAATGAAGACAAGTCAAGAGTAATAACAATTAGATTACCAGGGGTTGGATTTCATGGCACTATTCCACCTGATACCATTAGCCGTCTCTCAGCACTTCAAACTTTGAGCCTCAGATCCAATGTGATAAGTGGACATTTTCCTTCTGATTTCACCAATCTAAAAAACTTGTCTTTTCTCTATCTTCAGTTCAACAATCTGTCTGGTCCTTTGCCTGATTTCTCAGTCTGGAAGAACCTTACTGTTGTCAATTTGTCCAATAACCGTTTCAATGGTAGCATTCCAGTTTCACTTTCCAATTTGACTCAGCTTGCTAGTTTGAACCTCGCAAACAACTCTCTTTCTGGTGAAATTCCGGACCTGCAGTTGTCCAGATTGCAGGTGCTGAATTTGTCTAACAATGATTTGAATGGCAGTGTGCCTAATTCCCTCTTGAGGTTTCCTGAATCAGCATTCTTTGGTAACAATGTTTCTTTCGGAGGTTCTCTTGCTGTTTCTCCTGTGCCTCAACTGGCTTATGAACCATCTTCAAAGTCTAAGAAACATGGAAGGCTCAGCGAAACCGCACTGCTGGGAATTATTGTTGCTGCTGGTGTTTTAGGCCTTGTGGCTTTTGTTTCTCTGATGTTTGTGTGCTGCTCAAGGAGAAGTTATGAAGATGAGGTCTTCAGTGGGAAGTTGCAGAAGGGAGAAATGTCTCCTGAAAAAGCAGTCTCAAGGAACCAGGATGCAAATAATAAACTGGTTTTCTTTGAGGGATGCAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGCTGGGAAAGGGAACGTTTGGTACTGCATATAAGGCAATCCTAGAGGATGCAACCACGGTTGTTGTAAAGAGGTTAAAGGAGGTTGCTGTTGGTAAGAAGGATTTTGAGCAACACATGGAGATTGTAGGAAGTCTCAAACATGAGAATGTGGTTGAGCTGAAGGCATATTATTATTCCAAAGATGAGAAACTGATGGTATATGATCACTACAGTCAGGGGAGCATCTCTTCTATGTTGCATGGTAAAAGAGGAGAGGAAAGGGTGGCGTTAGATTGGGACACTCGGCTGAAAATAGCTTTAGGTGCTGCAAGAGGCATTGCACGTATCCATCTCGAGAATGGTGGCAGGCTTGTACATGGAAACATAAAGTCCTCAAATATCTTTCTCAACACTAAACAATACGGCTGTGTATGTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTGCCAATATCACGAGCCGCCGGTTACCGAGCACCTGAAGTTACTGACACAAGAAAAGCAGCACAACCCTCAGATGTTTACAGCTTCGGTGTTGTGTTACTAGAGCTTCTGACTGGGAAATCTCCTATTCACACTACTGGCGGTGATGAGATTATCCACTTGGTGAGGTGGGTTCATTCAGTTGTGCGTGAGGAGTGGACAGCTGAAGTGTTTGACTTGGAGCTTATGAGATATCCAAACATAGAAGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTGGTTAGGATGCCTGATCAGAGACCTAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTTAGGCAGATTGATACAGAAACTAAGACATCATCTGGGAACCAAGCACAACTTCAATTATCTCAACGTGGCAATGATAATTCTCCTTCCACTCCTTCCTACTTCCCATAA 1896 0.4288 MELLRILSSICFLCFILWQGNAEPVEDKEALLDFVKKFPPSRPLNWNESSPMCSSWTGVTCNEDKSRVITIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVISGHFPSDFTNLKNLSFLYLQFNNLSGPLPDFSVWKNLTVVNLSNNRFNGSIPVSLSNLTQLASLNLANNSLSGEIPDLQLSRLQVLNLSNNDLNGSVPNSLLRFPESAFFGNNVSFGGSLAVSPVPQLAYEPSSKSKKHGRLSETALLGIIVAAGVLGLVAFVSLMFVCCSRRSYEDEVFSGKLQKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDHYSQGSISSMLHGKRGEERVALDWDTRLKIALGAARGIARIHLENGGRLVHGNIKSSNIFLNTKQYGCVCDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDTETKTSSGNQAQLQLSQRGNDNSPSTPSYFP* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1256 631 ProSitePatterns Protein kinases ATP-binding region signature. 331 362 IPR017441 GO:0005524
Apr2g1256 631 Pfam Protein kinase domain 328 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1256 631 Pfam Leucine rich repeat 81 127 IPR001611 GO:0005515
Apr2g1256 631 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Apr2g1256 631 PANTHER OS05G0588300 PROTEIN 17 604 - -
Apr2g1256 631 PANTHER PROTEIN, PUTATIVE-RELATED 17 604 - -
Apr2g1256 631 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Apr2g1256 631 SUPERFAMILY L domain-like 37 206 - -
Apr2g1256 631 Gene3D Transferase(Phosphotransferase) domain 1 401 622 - -
Apr2g1256 631 Gene3D Ribonuclease Inhibitor 136 225 IPR032675 -
Apr2g1256 631 Gene3D Phosphorylase Kinase; domain 1 289 399 - -
Apr2g1256 631 SUPERFAMILY Protein kinase-like (PK-like) 329 593 IPR011009 -
Apr2g1256 631 ProSiteProfiles Protein kinase domain profile. 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1256 631 MobiDBLite consensus disorder prediction 601 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1256 Apr-Chr2 18815486 18819327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1256 1 628 Receptor kinase-like Gene Family AT4G23740 65.055 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr2g1256 Pkinase 1.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1256 - - gmx:100804799 1065.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1256 2 18815486 18819327 Apr2g1256 2 18815486 18819327 ECH
Apr6g0981 6 14414152 14416954 Apr2g1256 2 18815486 18819327 ECH
Apr7g0544 7 11869624 11872269 Apr2g1256 2 18815486 18819327 PCT