Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1245 ATGGAACAGAAAAGCATACTGATATCGGCGTTGAGTGTTGGGGTGGGAGTGGGAGTGGGGATTGGATTGGCTTCTGGGCAAACCGTTGGCAAATGGGGAGCCAACACTTTCTCCTCAAACGCTGTTTCTGCTGAGAAGATGGAGCAAGAAATGCTACGACAAGTCGTTGATGGAAGAGAAAGCAATCTCACTTTTGATAAGTTCCCTTATTACCTCAGTGAGCAGACGCGTGTTTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCTGATGTTTCTAAATACACACGTAATCTTGCTCCTGCAAGCAGGACTATTCTGCTTTCAGGGCCAGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTGGCTCATTACTTTGAGGCCAAGTTGCTTTTGTTGGATGTAACAGACTTTTCATTGAAGATTCAGAGTAAATATGGTTCTACCAACAAAGAATCTTCTTTCAAAAGATCCACTTCTGAGTCAACTTTGGAGCGGTTATCTGATCTATTTGGGTCATTTTCAATCTTTCCACAGAGGGAGGAACCTAAAGGCAAAATGCACAGGCCAAGCAGTGGAGTGGACCTCCAATCAATGGGGGCTGAAGCATCTAGCAATCCTCCAAAGCTCCGTAGGAATGCTTCTTCCTCTTCAAATATCAGTGGCCTTACTTTGCAAAGCAATCCTACAAATTCAGCTCCTCTGAAGCGTACAAGCAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGTCTCTTTATAAGGTTCTGGTTTTTGTGTCAAAAACTTATCCAATTGTGCTATATCTGCGGGATGTTGATAGGTTGTTATATAAATCACAAAGGATATATAACATGTTCCAGAAAATGTTGAAGAAATTATCTGGACCAATTTTGATTCTTGGTTCACGAGTCATTGATACTGATAATGACTACGAAGAGGTGGATGAGAAACTTACTTCCCTCTTCCCATACAACATAGAAATCAGGCCACCAGAAGATGAGTCACATCTTGTTAGCTGGAAGTCTCAATTAGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAAAACCATATCATGGAAGTGCTTGCAGCAAATGATCTTGATTGTGATGACCTGGATTCCATTTGTGTGCAAGACACAGTGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATTTCTTATCATTTGATGAAAAACAAAGACCCAGAATACAGAAATGGGAAACTTGTTATTTCTTGCAATAGTTTGTCCCATGCATTGAGTATATTCCACAAGGGGAAATCAAATGGAAGAGATACATCAAAATTGGAAGATCAAGCTGTAAAATCTGAGATGCAAAAAGGTGAAGGAACTGCTACAAAACCGGAAGCGAAGTCTGAAAATGCTGCTCCTGTAAAAAAGGCTGAAGCAGAAACATCAAATTCAGTGGGAAAGGCAGATGGTGAAAATTCAGTTCCGGCACCATCAAAAGCCCCTCAAGTTCCACCTGATAATGAGTTTGAGAAGCGAATAAGGCCGGAGGTAGTACCGGCAAAAGAGATTGATGTCACATTCTCTGACATTGGTGCCTTAGATGAGACCAAAGAATCCCTTCAAGAACTTGTAATGCTTCCTCTTAGAAGGCCAGACCTTTTCACTGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGTTGTTTGGTCCTCCTGGCACTGGGAAGACAATGCTAGCAAAGGCCATTGCAAAGGAGGCTGGAGCAAGTTTCATCAATGTGTCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCCTTATTCACGCTTGCAGCCAAGGTCTCCCCAACTATTATATTTGTGGACGAGGTTGATAGCATGCTTGGGCAACGGACCAGAGTCGGGGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTTATGACTCATTGGGACGGGCTTTTAACCAAACCTGGAGAGCGTATCCTTGTTCTGGCTGCAACAAATAGGCCATTTGATCTGGATGAAGCTATAATTAGGCGATTTGAAAGAAGAATCATGGTGGGACTACCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTTTTGGCAAAAGAAAAGGTGGATAGTGAACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATATACCGGAAGTGATCTAAAGAATTTGTGCACAACTGCTGCTTATCGACCTGTTAGAGAGTTAATTCAGCAAGAAAGGCTGAAGAGTCTGGATAAAAAGCAGAAAGCTGCCGAGGGAAAGAATGAAGATGTCCAAGACAGTGAAGAAGTACAATCTATAGATGCAGAAGAGGAAAGAGTTATTACCCTTAGGCCATTGAACATGCAGGATTTCAGAGAGGCCAAGAATCAGGTTGCTGCTAGCTTTGCAGCTGAAGGGGCTGGAATGAGTGAGTTGAAACAGTGGAACGATTTGTACGGAGAAGGAGGTTCAAGGAAGCAACAGCAATTGTCTTACTTCCTATGA 2529 0.4207 MEQKSILISALSVGVGVGVGIGLASGQTVGKWGANTFSSNAVSAEKMEQEMLRQVVDGRESNLTFDKFPYYLSEQTRVLLTSAAYVHLKHADVSKYTRNLAPASRTILLSGPAELYQQMLAKALAHYFEAKLLLLDVTDFSLKIQSKYGSTNKESSFKRSTSESTLERLSDLFGSFSIFPQREEPKGKMHRPSSGVDLQSMGAEASSNPPKLRRNASSSSNISGLTLQSNPTNSAPLKRTSSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDRLLYKSQRIYNMFQKMLKKLSGPILILGSRVIDTDNDYEEVDEKLTSLFPYNIEIRPPEDESHLVSWKSQLEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSICVQDTVVLSNYIEEIIVSAISYHLMKNKDPEYRNGKLVISCNSLSHALSIFHKGKSNGRDTSKLEDQAVKSEMQKGEGTATKPEAKSENAAPVKKAEAETSNSVGKADGENSVPAPSKAPQVPPDNEFEKRIRPEVVPAKEIDVTFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDSELDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLDKKQKAAEGKNEDVQDSEEVQSIDAEEERVITLRPLNMQDFREAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKQQQLSYFL* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1245 842 ProSitePatterns AAA-protein family signature. 666 685 IPR003960 GO:0005524|GO:0016887
Apr2g1245 842 MobiDBLite consensus disorder prediction 761 775 - -
Apr2g1245 842 MobiDBLite consensus disorder prediction 183 237 - -
Apr2g1245 842 MobiDBLite consensus disorder prediction 761 780 - -
Apr2g1245 842 Gene3D - 522 694 IPR027417 -
Apr2g1245 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 762 IPR027417 -
Apr2g1245 842 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 842 - -
Apr2g1245 842 Gene3D - 695 776 - -
Apr2g1245 842 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 842 - -
Apr2g1245 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 376 IPR027417 -
Apr2g1245 842 SMART AAA_5 559 696 IPR003593 -
Apr2g1245 842 CDD AAA 561 694 - -
Apr2g1245 842 Pfam ATPase family associated with various cellular activities (AAA) 563 693 IPR003959 GO:0005524|GO:0016887
Apr2g1245 842 Coils Coil 755 775 - -
Apr2g1245 842 Pfam AAA+ lid domain 717 754 IPR041569 -
Apr2g1245 842 MobiDBLite consensus disorder prediction 199 237 - -
Apr2g1245 842 MobiDBLite consensus disorder prediction 450 472 - -
Apr2g1245 842 MobiDBLite consensus disorder prediction 450 505 - -
Apr2g1245 842 Gene3D - 47 355 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1245 Apr-Chr2 18695839 18702014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1245 474 755 Calmodulin-binding Proteins AT3G56690 35.517 7.35e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1245 - - gmx:100807464 1478.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1245 2 18695839 18702014 Apr2g1245 2 18695839 18702014 ECH
Apr7g0555 7 11974654 11981203 Apr2g1245 2 18695839 18702014 PCT