Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1224 ATGGCGCAACAACTGTGTGAAGACAAATCGAGGGACATGGCTTCATCAACCGGGTTCTGCTACTCAGATGTGTCTTCTGCTAATCCAACGGTTCAAGTTCAACCCCATCTCATGAACCATATTCAAGGCTTTGTGACAGACCCAGAGATGTTCAACCTCACCACAGGCATGGAGATGATAGGGTTTTCCAAGAATCTTCAGCAACAAAGTGAAAGCAACGGTGTCATGTGGAAAAGTTTCTTCGGCAAACCAAGTCAACACGCGGGTCCTTCCTCTTCCAAGACGATGAACGAGTCTTCAAGCAGTTTTTACAACCCGCATGAGTATAATAAGCAAGATTTCACATCAGGGATTTCTGAGACAAGTAGCGAAAATTTAATCGTAGGTGGTGCTCATGATTCTGCCCCGTGGCAAGAGAACAGGTTAATAGTTGATGACTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGTAACGAAAGGCCAAGTCAAGGCCTTTCACTCTCTCTTAGTTCAACCAACCCTTCAAGTATTGCGTTGCAATCTTTTGAGCTAAGGCAAAGTAGCCATCATCAGCACCAACCCGATTTTGTTTCTTCAAAAGAGGGGTTCTTTGGAAAATCTCAGCAACAGCAAATGTTGCAAGATGGGTATTTCAGTTCTAATAAAGCTGCGAATTTTTATCAGGGACAATTTCTAATCAAGAACTCCAAGTTCTTGGTACCTGCACAGGACCTTCTGAACGAGTTTTGTAGTCTAGGGACAAAGGAAAATGATGTACCAAAGCCAAAGTACTCTCAAAAGAACAAGCAGTGGGAAGAGGATAACGCTGGCGGTTCCTCAAAGAACCATTCTCTCAGCTCTCTCGAGTTCGTGGAATTGCAAAAGAGAAAAACAAGGCTGCTTTCGATGCTGGAAGAGGTTGATAGAAGATACAAGCACTATTGTAATCAAATGAAGGCTGTGGTCTCCTCCTTTGAAGCAGTGGCGGGTAATGGGGCCGCCACAGTTTACTCGGCGTTGGCTTTGAAAGCCATGTCTAGACATTTTAGATGTTTGAAGGATGGGATTTTGGATCAAATTCAAGCCACAAGGAAAGCCATGGGAGAGAAAGATCCCGTTGCACCGGGCACAACAAGGGGTGAAACACCTAGGCTTCGAATCATTGACCAAGCATTGAGACAACAAAGGGCATTTCAGCAAATTAACATGATGGAAACCCATCCATGGAGACCCCAACGTGGTCTTCCCGAACGATCCGTTTCCGTTCTTCGGGCTTGGCTTTTCGAACACTTTCTCCACCCGTACCCAAGCGATGTTGATAAACATATTCTAGCCCGCCAAACCGGTCTCTCAAGAAGTCAGGTTTCAAATTGGTTTATTAACGCGAGGGTGAGGCTATGGAAGCCGATGGTAGAGGAAATGTACTTGGAAGAAGAGAAGGAGCAACAAAACAACATAGCATCCTCGGAAGGTGGCACAAATCATGAAGAGGATCAAAACCAATCTCCTTCAACCCGACCTGAGGATCAAAAGTCAACGCAAGCTTCACTCCTTCGAATCGACTCAGAGTGCGTGTCGTCCATCATCAACAACCCAGATCATAAAAACGACACAAAGAGCAGCAAAACCATCCAAAACGACCACCACATGAATCCCACGGACACATTTGGTTCAGTGGAGCTTGACTTCTCATCTTACACACACCATTCCTCCGGTACGGTTCCTTACACAACAAATGATCACAATGCAAATCAGAGTTTCCACGGTGGCAGTGGAGTGTCGTTAACGCTAGGGTTACAACAGCACGGTGCAGGTGGGGTGAGTTTAGCGTTTCCGTCAGCAACACAAAACTCATTGTTCTATCAAAGGGACCAGATTGAGGAGTGTCAAACGGTTCAGTACTCTCTTTTGGATGGCGAAGGACAAAATATGCCGTATAGGAATCTTATGGGGACACAGTTGCTTCATGACTTGGCATGA 1980 0.4545 MAQQLCEDKSRDMASSTGFCYSDVSSANPTVQVQPHLMNHIQGFVTDPEMFNLTTGMEMIGFSKNLQQQSESNGVMWKSFFGKPSQHAGPSSSKTMNESSSSFYNPHEYNKQDFTSGISETSSENLIVGGAHDSAPWQENRLIVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIALQSFELRQSSHHQHQPDFVSSKEGFFGKSQQQQMLQDGYFSSNKAANFYQGQFLIKNSKFLVPAQDLLNEFCSLGTKENDVPKPKYSQKNKQWEEDNAGGSSKNHSLSSLEFVELQKRKTRLLSMLEEVDRRYKHYCNQMKAVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGILDQIQATRKAMGEKDPVAPGTTRGETPRLRIIDQALRQQRAFQQINMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQNNIASSEGGTNHEEDQNQSPSTRPEDQKSTQASLLRIDSECVSSIINNPDHKNDTKSSKTIQNDHHMNPTDTFGSVELDFSSYTHHSSGTVPYTTNDHNANQSFHGGSGVSLTLGLQQHGAGGVSLAFPSATQNSLFYQRDQIEECQTVQYSLLDGEGQNMPYRNLMGTQLLHDLA* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1224 659 MobiDBLite consensus disorder prediction 485 515 - -
Apr2g1224 659 Pfam Homeobox KN domain 426 465 IPR008422 GO:0003677|GO:0006355
Apr2g1224 659 MobiDBLite consensus disorder prediction 257 283 - -
Apr2g1224 659 CDD homeodomain 409 470 IPR001356 GO:0003677
Apr2g1224 659 SMART prehox3 227 358 IPR006563 -
Apr2g1224 659 SUPERFAMILY Homeodomain-like 410 475 IPR009057 -
Apr2g1224 659 ProSiteProfiles 'Homeobox' domain profile. 406 469 IPR001356 GO:0003677
Apr2g1224 659 SMART HOX_1 409 473 IPR001356 GO:0003677
Apr2g1224 659 MobiDBLite consensus disorder prediction 84 106 - -
Apr2g1224 659 MobiDBLite consensus disorder prediction 478 515 - -
Apr2g1224 659 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 616 - -
Apr2g1224 659 MobiDBLite consensus disorder prediction 260 276 - -
Apr2g1224 659 MobiDBLite consensus disorder prediction 85 106 - -
Apr2g1224 659 Pfam Associated with HOX 233 356 IPR006563 -
Apr2g1224 659 MobiDBLite consensus disorder prediction 528 552 - -
Apr2g1224 659 Gene3D - 412 474 - -
Apr2g1224 659 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1224 Apr-Chr2 18453773 18458335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1224 107 659 Homeobox Transcription Factor Family AT5G41410 46.549 7.89e-140 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Apr2g1224 POX 7.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1224 - - gmx:100792789 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1224 2 18453773 18458335 Apr2g1224 2 18453773 18458335 ECH
Apr7g0579 7 12285271 12290586 Apr2g1224 2 18453773 18458335 PCT