Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1221 ATGGGATTCCCAGTGGGCTACACGGAGCTTCTCTTCCCAAAACTCCTCCTTCACCTCTTCTCCCTCTTTGTTCTCATCAGAAAACTCATTTCCACCCTTTTCGGCTTCATGGGCCTCCACCATTTCCTCGAACCCGACATTACCTGGCCCGAAAGTTCGACCCGGATACCCGAATTCGAGTCGGTGTCTGCAATCTTAATAAGGGAAATTCTTCCGGTGGTGAAGTTCGGGGAGCTGGTGGACCCACCCGAGAGTTGCGCTGTGTGTTTGAGTGAGTTCGAGGAAAACGATGAGATCAGACGGTTGGCAAATTGTCGACACATATTCCATCGAGGGTGTTTGGACCGTTGGATGGGGTACGATCAGAGAACGTGCCCCTTGTGCCGAACACCCTTTGTACCCGAAGATATGCAAGCTCTTTTTAATCAAAGACTTTGGGCTGCTTCTGGGATCCCCGAATTCTACTTACAATATCCTCATGTTGCTTAA 489 0.499 MGFPVGYTELLFPKLLLHLFSLFVLIRKLISTLFGFMGLHHFLEPDITWPESSTRIPEFESVSAILIREILPVVKFGELVDPPESCAVCLSEFEENDEIRRLANCRHIFHRGCLDRWMGYDQRTCPLCRTPFVPEDMQALFNQRLWAASGIPEFYLQYPHVA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1221 162 PANTHER BRH1 RING FINGER PROTEIN 1 158 - -
Apr2g1221 162 SUPERFAMILY RING/U-box 66 135 - -
Apr2g1221 162 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Apr2g1221 162 SMART ringv_2 85 129 IPR011016 GO:0008270
Apr2g1221 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 137 IPR013083 -
Apr2g1221 162 SMART ring_2 86 128 IPR001841 -
Apr2g1221 162 CDD RING-H2 86 129 - -
Apr2g1221 162 Pfam Ring finger domain 85 129 IPR001841 -
Apr2g1221 162 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1221 Apr-Chr2 18423050 18423613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1221 1 150 C3H Transcription Factor Family AT1G63840 58.710 3.44e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1221 K16281 - jre:109014495 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1221 2 18423050 18423613 Apr2g1221 2 18423050 18423613 ECH
Apr7g0583 7 12374770 12375545 Apr2g1221 2 18423050 18423613 PCT