Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1219 ATGTCTTCTGATCTCTATGGTTTTGGAACTACTTTCCACACACATTCAAGCCCAGACTTGGTCTTTTCTGATGGAGTTGGAGACCTTCCATTTCTCTGTGACCCTTTTCCTCTCCTCACCAATTCTCCCACTGATGTAGCTCAAGAGAATTCAACCACTCTTCCTTCTTCCGTTGACCCATTTTCCCCATCTTTTTTCTCATTCTCTCCTCCAAGTGCCCACTTGGAAAACCTCACCCTTTATCATCATGCTAACAATAACCGTGTGCACGCTCTGTCAAGTGGCCAAAATTTAGCAAATGAAATTGGAAGTTTCTCTGGTTTTGATGGGTTGGAAGTGAAGAGTGAGGAATGTCAAGTGGGTGTTGATTATGTGTACGGTCAGCAATATCTTCCTCACAGTTATAGTGGCACTGAAAATGTTTCAAAGTACATGCAGAGGAGTTTCAGCAGTAACTCTTTTGAAGGGAAGCCAGGTTTTGTGTCACAGCCTCACTGTGATGCTCTCGTGGATTCCCCAAAATTTCAAAGCCATGACATGAGCTCCCCTGAAGATAGTCTCTTCGGTGGACAAATGAGAAGGGTTTGCAGCACAGGAGATTTGCAGAACATGAAGGCAAATCACATGTCCTCATCGGAGGCGCCATTGTTGGAGGAACCGAACTTCAAAGTAGGGCGTTACAGTGCGGAAGAAAGAAAAGAGAGAATTTCTAAATACAGAGCCAAGAGAACCCAGAGGAACTTCAATAAGACCATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGCCCACGCATACGTGGCAGATTTGCACGCAACGACGAGGCCAGCGAGATTCCGAAGCCTCCCCGATATGAAGACGAAGTCGATTTCTGGATTGAAGAATTGCGGTTGCATGAAGAGCTAGACGATGTAACAGTGGGAGCAGAACAATATGTGAAAAGTTATGGAGCTAGTCAATTTCAGTACCGTGGCTTTTGA 984 0.4512 MSSDLYGFGTTFHTHSSPDLVFSDGVGDLPFLCDPFPLLTNSPTDVAQENSTTLPSSVDPFSPSFFSFSPPSAHLENLTLYHHANNNRVHALSSGQNLANEIGSFSGFDGLEVKSEECQVGVDYVYGQQYLPHSYSGTENVSKYMQRSFSSNSFEGKPGFVSQPHCDALVDSPKFQSHDMSSPEDSLFGGQMRRVCSTGDLQNMKANHMSSSEAPLLEEPNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASEIPKPPRYEDEVDFWIEELRLHEELDDVTVGAEQYVKSYGASQFQYRGF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1219 327 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Apr2g1219 327 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 28 324 IPR045281 GO:0009909
Apr2g1219 327 PANTHER CCT MOTIF FAMILY PROTEIN 28 324 - -
Apr2g1219 327 Pfam CCT motif 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1219 Apr-Chr2 18408158 18410274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1219 228 279 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 9.92e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr2g1219 CCT 9.6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1219 - - gmx:102665661 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1219 2 18408158 18410274 Apr2g1219 2 18408158 18410274 ECH
Apr7g0585 7 12381925 12383162 Apr2g1219 2 18408158 18410274 PCT