Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1217 ATGGGCGGTTGCTGCTGTTGTTGTTCTTCTAAGGAGACCGTATTGAGCGCTCCACCTGCGTATTATTATTATCCTAGAGCATCAGATGAGCATGTTCCTCTATCATCTCACCCGGGTGCTGCTTCTGCTTTCTCTGGGAGGCTCTTGGTTGACACTAATCTAGATACTTCGAGTCCTGATACTTATAGACCTCCTCCTGCTCCCATCCCTTTCAATGTTACCACTCAAACTCCACCTTTGGCTCAAGAAATTCGTGGTGACAAGAACAATACATCCTTGCATTCTACAAATTCGAATTCTAATTCAATTCAAGAACCAGTTGCTGGGGACAATCATGGGACCTCAGTTAAGTTGGAAGACCTAAAGGAATCAGGATGCAAAGTTCAGACTGATCTAGAAATAGATTCAGCAAAGGATTCTGAAATTGAACTTCCAAAGTTGGGAGAATCTATAAATTTAGAAGAGGAGGATGCATGCCCAATTTGTTTAGAGGAGTATGATGCAGAGAACCCAAAGCTTGCCACAAAATGTGATCATCATTTTCACCTTGCATGCATTCTGGAGTGGATGGAAAGAAGTGAAACTTGCCCTGTGTGTGATCAGGATTTGGTTTTCAACCCTCCCATTGAATAA 633 0.4265 MGGCCCCCSSKETVLSAPPAYYYYPRASDEHVPLSSHPGAASAFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTTQTPPLAQEIRGDKNNTSLHSTNSNSNSIQEPVAGDNHGTSVKLEDLKESGCKVQTDLEIDSAKDSEIELPKLGESINLEEEDACPICLEEYDAENPKLATKCDHHFHLACILEWMERSETCPVCDQDLVFNPPIE* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1217 210 MobiDBLite consensus disorder prediction 82 114 - -
Apr2g1217 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 205 IPR013083 -
Apr2g1217 210 SUPERFAMILY RING/U-box 150 206 - -
Apr2g1217 210 ProSiteProfiles Zinc finger RING-type profile. 159 200 IPR001841 -
Apr2g1217 210 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 210 - -
Apr2g1217 210 MobiDBLite consensus disorder prediction 82 109 - -
Apr2g1217 210 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 210 - -
Apr2g1217 210 SMART ring_2 159 199 IPR001841 -
Apr2g1217 210 Pfam Ring finger domain 158 199 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1217 Apr-Chr2 18387221 18389927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1217 1 206 C3H Transcription Factor Family AT5G41350 53.271 1.27e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1217 - - gmx:100816369 367.081