Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1216 ATGGAAGGATGGTCGTCTTTGTCAAATGGGTCTTCCTTAGATTGCATTGGAGTTGAAAGAGTGTTTGCATTTCATGATAATGATTGTTTCCTTGTAAAAGATCATGTTGATAATGCTGCTGATAATGACAAAGTTAAACAAAAATGCTCGTTCTATCAAAATTTTCCGGATTACCTGAAGGATAGTTGTTCTAAAGGTTTTGCTCGGTCTGTGCCGGTTGGGCTCGGCAATGGTCAATTGGTGGATTTGTACAAACTGTTCTCCCTTGTGAAGGAAAGAGGAGGGTATGCCGTGGTGTCAGAAAAAGGATTGTGGGGTAATGTGACCAAGCAATTGGGTTTGGACCTTGAACTTTTGGCTTTGGTGAAACTAGTTTATGATAAGTATCTGAATGATTTTGAAAGGCAATTCAGGAACACGTTTGAAGAGAAGAACATAAAAAATGGGAATCATGGGTGTGATTGGGATTTTGAGTCGTTGCCGTTAGATTTGGAGAAAGAGTTTAGAGGTTTATTACGTCCAAATCTAAAGGACAAAGATGATGATGAACTTGTCATGTTAGAATCAGAAAAAATTAGGAAGTACATTGATTTGGTTAGCTGCAACAATGATACTAATATATTGGACACCAAAAATCAAAATAACAAATGCAAGGATGTCCAACAAGTTGATGGTGATGATGATGATGAAAAATCCTGTAATGGCATTAAGGATGATCCTGCTTCCTTGGGTGCGGAAAGTACTAAGAAGGAATTTACTAAGAACAAACGCAAACGGGAAGCTTTAACTGCCATGCTAAACTGGATGAGGCATATTGCAAAACATCCTCTTGATCCTTTAACTCAACCAATGCCAAAACCATTAAAATGGAAGGAGTATGAAGGCCAGAACTTTTTTGGTCAGGTACTGAGAGCAAGAGAGGTTCTGTTGCAGAGCCGGCATGTAGAACGAAATAGTGGATCTTCTTCTTTGCAGAAGGTGAAGATGCATCCTGCCATGTATGATGATCCTGTCACTCTTGATCATCGTGCTACAGTGAGGTTGAGATGTAGTGAAAGGCTGCCTACCTCTGTTAAATCTCGGTCATGCTCTTGCTGCAATCCATGTTCCCCCAATGGAAATAGATTGGCAAGTTCAATCAATACAGAGGCAGAAAACTGTCCTCTGGAGAAAAAAACCACACCAGATTTGTTGACCGCAAAAATCATGGCTGATCCATCAGGGGATGATGTTCGCGAAAAGCAAGTTTCTGTAGGTCCCCTTTTTCAAGCAGAAGTTCCAGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACTCAAGTATGGCCTTTGAAACATGACACAAAACCTGCTACTGAAACGGATCTTCTTGGGAGAGGAAAACAATCGAAGTGTTGCTGCCAATTTCGAGGTTCTGTTAAGTGTGTTCGATTTCATATTATTGAAAATAGGTTGAAATTGAAGCTTAAATTGGGTTCTGTATTTTACCATTGGGGATTTGATCAAATGGGTGAGGAAGTTTCACTTCAATGGACAGCTGAAGAAGAAAAGAAATTTAAGGATATAATGAGGTCAAATATTCCCTCACAAAAAAAGTTGTTTTGGAACAACCCCTCCAAATACTTTCCAAATAAGACAAGAAGAGACTTGGTGAGCTATTACTTCAATGTGTTTCTTATTCAACTAAGAAGCTATCAGAATCGGGTGACCCCAAAGAATGTTGATAGTGATGATGATGAAGTAGAATTTGGGTCTTTCAGTGATGGTTTTGGGGTGGAAGCTGTCAAGGTTTCAAGTATTGATTTGCTGGAGTGTTCTGAGAACAAGCAGTGCACTGATTCGGAGTAG 1860 0.3973 MEGWSSLSNGSSLDCIGVERVFAFHDNDCFLVKDHVDNAADNDKVKQKCSFYQNFPDYLKDSCSKGFARSVPVGLGNGQLVDLYKLFSLVKERGGYAVVSEKGLWGNVTKQLGLDLELLALVKLVYDKYLNDFERQFRNTFEEKNIKNGNHGCDWDFESLPLDLEKEFRGLLRPNLKDKDDDELVMLESEKIRKYIDLVSCNNDTNILDTKNQNNKCKDVQQVDGDDDDEKSCNGIKDDPASLGAESTKKEFTKNKRKREALTAMLNWMRHIAKHPLDPLTQPMPKPLKWKEYEGQNFFGQVLRAREVLLQSRHVERNSGSSSLQKVKMHPAMYDDPVTLDHRATVRLRCSERLPTSVKSRSCSCCNPCSPNGNRLASSINTEAENCPLEKKTTPDLLTAKIMADPSGDDVREKQVSVGPLFQAEVPEWTGVVSESDSKWLGTQVWPLKHDTKPATETDLLGRGKQSKCCCQFRGSVKCVRFHIIENRLKLKLKLGSVFYHWGFDQMGEEVSLQWTAEEEKKFKDIMRSNIPSQKKLFWNNPSKYFPNKTRRDLVSYYFNVFLIQLRSYQNRVTPKNVDSDDDEVEFGSFSDGFGVEAVKVSSIDLLECSENKQCTDSE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1216 619 CDD ARID 51 134 - -
Apr2g1216 619 Gene3D - 31 149 IPR036431 GO:0003677
Apr2g1216 619 SUPERFAMILY ARID-like 38 139 IPR036431 GO:0003677
Apr2g1216 619 SMART bright_3 46 139 IPR001606 GO:0003677
Apr2g1216 619 Pfam ARID/BRIGHT DNA binding domain 50 134 IPR001606 GO:0003677
Apr2g1216 619 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Apr2g1216 619 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 619 - -
Apr2g1216 619 CDD SANT 515 562 IPR001005 -
Apr2g1216 619 SMART ARID_2 42 134 - -
Apr2g1216 619 ProSiteProfiles ARID domain profile. 45 138 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1216 Apr-Chr2 18351577 18360785 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Apr2g1216 ARID 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1216 - - gmx:100819320 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1216 2 18351577 18360785 Apr2g1216 2 18351577 18360785 ECH