Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1209 ATGCCACTATGGTGGGGAAAGTCTTCGTCCAAAGAGGTGAAGAGGAAAGGAAACAGGGAAAATATTATTGATACAATACAGCGGAAGTTAAAAAATGCTTCTGAAGAAAAATGCAACTGTAAGTTGGGAAGATCAAGAAGACATGATATTGACACTATCTGCGTGAAGGAATCTAGATCCATTGCACCTTTGCAATCACCACTACCCTTGACACATGTCTCCCGTTGTCAAAGTTTTGCAAAGCCACACCCATTACCAGGCTCACACCTTGCTTCTTCTGGTGATGCAAATTCTGGAATTATTTTAACATCAAAACTGGAAAGAGGCACAGAATCTAAGCCATCTCTATATTTTTCCCTTCCAAAACCTGGTTATTTGTCTAACAAGGAATATCCTACAGATGCGGAGGGAGATATAGCTACTGCATCTGTCTCTAGTGACAGCTCAATTGATAGTGGTGATTCATTTGATTCGCATCTTGTTAGTCCTCTGGCATCTGACTGTGAAAATGGAAACAGAGTCACCATTAGTAGTTCTTTCAGTGTGGTACAGGAGAATCAATCACTTATTTCTTTTCAAAGGAACTCAAGAGCACCCTCAAAACCCGCTCCTCAATTGTGCAATAATAAGCCTTTACCTACAACACCAAAAGGGGTTCCTTTACGTCCGCAGAATCTGCAAATAGCTTGCCCTAGTGGTCTGTGCAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCTAGAAGTCCAATGAGAGCATTTGGTCCTGAGCAAATGTTGAACTCTGGATTACAGACAGTAAAGCCTTATCCAGATAGAGCTTCTGGGCACTGCTCTAGTCCAGGTTCTCGCCATATTTCTGCTCATAGTCCAGTTGGTGGGAATCCATTGGGACAGATGTTTTGGCCACAGAACAGGTGCAGCCCTGAGTGTTCTCCAATACCTAGTCCCAGAATGACAAGCCCTGGTCCCTGTTCCAGGATACAGAGTGGTGCTGTAACCCCTCTGCATCCACGAGCTGGAGGTGCTACAACAGAATTGCCTGCAAGACATCCTGACAATGCAAAACAACAAACTTATCAGTTACCACTTCCTCCAATAACAGTCGCAAAATCTTGTATGCTTCCTCCAACCTATTCTGCATCCACAACACCCTCAGCCCCTCGTAGTCCTTCCAGAGCAGAAAATCCAACAAGCCCAGTTTCAGGCTGGAAAAAGGGGCAGTTGCTTGGGAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTCTCAGATGATGCTAAATCAAGGGAAAGTGCCCAGCAACTTTGCCAAGAAATTGCACTGCTGAGTCAGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTAAATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTGGTTCAAGAATATGGCCAGTTAGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTCTGTCAGGACTTGCATATTTGCATGCAAAGAACACTGTTCACAGGGACATTAAAGGAGCAAATATATTGGTGGACCCTAATGGGCAGATAAAATTGGCAGATTTTGGAATGGCAAAGCATATAAGTGGGCAGTCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAAATGGTTGTAATCTTGCTGTTGATATATGGAGTCTTGGATGCACTGTTTTGGAGATGGCAACAACTAAACCTCCCTGGAGCCACTATGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACAATGCCAGATCAACTGTCAGAAGATGGAAAAAATTTTGTCAGGCTTTGTTTGCAAAGGAATCCTCTCAATCGTCCCTCAGCTGCTCAACTTCTAGAGCATCCATTTGTTAAAAATGCTATACTGGAAAGATCCATTTTCACTGCTGATTCTTCAGAAGCAACACATGTTACAAATGCAGTGAGATCTTTGGCCTTTGGACCTGCCAAACGTAATTTATGTTTAGACTCAGAAGTGGCTGGTATATATCTGCCTAGAAGCCTGAGAACTGACTCTAGATCAAGTGATGGACGTACACTAAGGAACATCTCTTGCCCCGTTTCTCCCTCGGGGAGCCTACTTTTGCCTTCTAAATCATTGCATACAAGTGGAAGGATGTCTCCCTCTCCAATATCTACCCCTCATCCTGCATCTGGCTCGGCTACACCACTGGCCAGTAGTGGTGGTGCAATACCAATTCATCAGACAAAGCAACCAATATTCTCATTTGAAGCTGTGGGTATGATCCAAAAGTCGCAGAATGGTTTTTTTTCAAATGGAAGCACTGCTTATCGGGGGTCTAAGCATGAGCAGTTTTGGAGAAACTCGCAAAATACACATGCTTCCCGGGATATAGTTTCATCTGATAATGATACTCTTCCAAGCCATACTGGGAAGACTTTCCAGGGAGACCCAAGAGAATTTCGTGATGAAAAGCCATACTTGTCAGATCGTGTTTCACAACAGCTGTTGAGGGATTATATGCGGCTAAATGCATTCCTGGATCTTAAGCCCAGTGCCCCAGTGCTCCGTCGTATAAATCGCTTATGA 2676 0.4327 MPLWWGKSSSKEVKRKGNRENIIDTIQRKLKNASEEKCNCKLGRSRRHDIDTICVKESRSIAPLQSPLPLTHVSRCQSFAKPHPLPGSHLASSGDANSGIILTSKLERGTESKPSLYFSLPKPGYLSNKEYPTDAEGDIATASVSSDSSIDSGDSFDSHLVSPLASDCENGNRVTISSSFSVVQENQSLISFQRNSRAPSKPAPQLCNNKPLPTTPKGVPLRPQNLQIACPSGLCSAPDSSMSSPSRSPMRAFGPEQMLNSGLQTVKPYPDRASGHCSSPGSRHISAHSPVGGNPLGQMFWPQNRCSPECSPIPSPRMTSPGPCSRIQSGAVTPLHPRAGGATTELPARHPDNAKQQTYQLPLPPITVAKSCMLPPTYSASTTPSAPRSPSRAENPTSPVSGWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRESAQQLCQEIALLSQLRHPNIVQYYGSETVNDKLYIYLEYVSGGSIYKLVQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHISGQSCPFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSHYEGVAAMFKIGNSKELPTMPDQLSEDGKNFVRLCLQRNPLNRPSAAQLLEHPFVKNAILERSIFTADSSEATHVTNAVRSLAFGPAKRNLCLDSEVAGIYLPRSLRTDSRSSDGRTLRNISCPVSPSGSLLLPSKSLHTSGRMSPSPISTPHPASGSATPLASSGGAIPIHQTKQPIFSFEAVGMIQKSQNGFFSNGSTAYRGSKHEQFWRNSQNTHASRDIVSSDNDTLPSHTGKTFQGDPREFRDEKPYLSDRVSQQLLRDYMRLNAFLDLKPSAPVLRRINRL* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1209 891 MobiDBLite consensus disorder prediction 378 402 - -
Apr2g1209 891 Gene3D Transferase(Phosphotransferase) domain 1 401 686 - -
Apr2g1209 891 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 804 - -
Apr2g1209 891 Pfam Protein kinase domain 404 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1209 891 SUPERFAMILY Protein kinase-like (PK-like) 401 739 IPR011009 -
Apr2g1209 891 MobiDBLite consensus disorder prediction 820 841 - -
Apr2g1209 891 MobiDBLite consensus disorder prediction 820 851 - -
Apr2g1209 891 MobiDBLite consensus disorder prediction 736 773 - -
Apr2g1209 891 MobiDBLite consensus disorder prediction 378 405 - -
Apr2g1209 891 ProSiteProfiles Protein kinase domain profile. 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1209 891 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 804 - -
Apr2g1209 891 SMART serkin_6 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1209 891 ProSitePatterns Protein kinases ATP-binding region signature. 409 432 IPR017441 GO:0005524
Apr2g1209 891 CDD STKc_MEKK1_plant 403 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1209 Apr-Chr2 18264445 18271789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1209 1 880 MAP Kinase Kinase Kinase AT1G63700 56.730 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr2g1209 Pkinase 6.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1209 K20717 - gmx:100814422 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1209 2 18264445 18271789 Apr2g1209 2 18264445 18271789 ECH
Apr2g1209 2 18264445 18271789 Apr1g0450 1 5515193 5520675 PCT