Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1203 ATGGTGCCAGACAACATGAAGAAGCAACTTGCTTTGGCTGTGAGAAGCATTCAGTGGAGCTATGCAATCTTCTGGACTGATTCAACTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACTAGGAAAACAAGTCAAGGTGTGGAACTTAATTCTGACCAAATGGGGTTGCAGAGAAGTGAACAGTTGCGAGAGCTTTTCAAGTCTCTCAAAACTGCAGAAACCAACCCACAAACGAAGAGGCCTTCAGCAGCACTGTCTCCTGAAGATCTCACTGATGCAGAGTGGTATTACTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCAGGAAGAACTCTAGCAAAGGGCCAACCAATTTGGCTGAACAATGCCGATTCATCTGATTGTAGAGTTTTTAGTCGTTCTCTGCTGGCAAAGAGTGCATCTATCCAGACAGTGGTGTGCTTTCCATTTTTGGAAGGGGTTATTGAGCTAGGTACATCTGATCAGGTCTCAGAAGATCTTAGTCTCATTCAACGGATCAGAACTTCTTTCTTGAATACTCTTTGTGTCAATGTTCCCAATAAGTCTGGAGCTACATTGAAATCAAGAAACGAGGAAGATGTTGCTTGTGTAGCATTTGATCATAATGCTTACAATGTTGAATCAATTCCAGAAGTTGGGTATGGCATAATCAACACAACCTCTCCTAATGGTAGTTCAAATGCATTACAGGCTAATCAACCACCAGATGAAACATTCACGGTTGAAAAGATAACCAGTGGCACCTCTCAAGTCCAAAGCTGGCAAGTTATGGATGATGAATTGAGCAACTGTGTCCACAATTCCATGAATTCCAGTGACTGTATATCACAAACTTTAGCCAGCCCTAAGAAGATTGCTTCTGCCCTCAAGGGTGATAACCCTTCTGCCCCTTGTGCCCGGGATCTTCAGAAGTGCAGCAACACAAAAATGACCGTAGTGGATCCTCTAAGTGATGATTGGCATTATCAGAGAGTTCTTTCTTCCCTTTTGAAAGGCTCTGACCAATTACTCATGGGGACACATTTTCAAAACATTCATCAGGAATCAAGCTTTGTCAGTTGGAGAAAAGAAGGGGCAATGAATTGCCAATGGCCAAGAGCAGGAACCTCACAGAACTTGTTGAAGAAAGTATTGTTTGAAGTTCCTCGGATGCACTTGGATGGGTTACTTGAGTCTCAAGAAGAGAATGACTATAAAGAGGGAATGAGACTAGAGGCTGATGAAATTGGCATGAACCATGTTTTGTCAGAGAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTGAGGTCAATGGTTCCTTCAATTAGTAAGGATGACAAAGTTTCAATACTAGATGATGCAATTGAATACCTTAAAAAGCTCGAGAAAAGGATAGAAGAGTTGGAAGCTCAGAGGGGGGTAAAAGATATAGAGAGTGGAACTAAAAGATCACCTCAAGATATGATGGAGAGGACTTCTGATCATTATTATAACAAAACTAATAATGGCAAGAAAGCAGTGGTAAAAAAAAGGAAGGCTTGTGGCATAGAAGAAACAGTAAGAGAGATTAATTCAGATACTTTAAGAGGTAGTTCTACTAATGATGTTGCTGTCTTTACTAGTAATAATGAAATTGTAATCGAAATGAAGTGCCCTTCAAGAGCAGGAAGGTTGATGGAAATTATGGAAGCTGTCAACAGTCTCAATATAGATTTTAATTCAGTTCAGTCAACAGAAGCTGATGGGAATCTTTATCTAACCATTAAATCTGTGTTCACAGGACCAACTATAGCAACTGCAAAAAGGATCAAACAAACACTCCAAAAAGTAGCTTTTAAGTGTTGA 1890 0.4063 MVPDNMKKQLALAVRSIQWSYAIFWTDSTTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQMGLQRSEQLRELFKSLKTAETNPQTKRPSAALSPEDLTDAEWYYLVCMSFVFNIGQGLPGRTLAKGQPIWLNNADSSDCRVFSRSLLAKSASIQTVVCFPFLEGVIELGTSDQVSEDLSLIQRIRTSFLNTLCVNVPNKSGATLKSRNEEDVACVAFDHNAYNVESIPEVGYGIINTTSPNGSSNALQANQPPDETFTVEKITSGTSQVQSWQVMDDELSNCVHNSMNSSDCISQTLASPKKIASALKGDNPSAPCARDLQKCSNTKMTVVDPLSDDWHYQRVLSSLLKGSDQLLMGTHFQNIHQESSFVSWRKEGAMNCQWPRAGTSQNLLKKVLFEVPRMHLDGLLESQEENDYKEGMRLEADEIGMNHVLSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIEYLKKLEKRIEELEAQRGVKDIESGTKRSPQDMMERTSDHYYNKTNNGKKAVVKKRKACGIEETVREINSDTLRGSSTNDVAVFTSNNEIVIEMKCPSRAGRLMEIMEAVNSLNIDFNSVQSTEADGNLYLTIKSVFTGPTIATAKRIKQTLQKVAFKC* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1203 629 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 189 IPR025610 -
Apr2g1203 629 Gene3D - 426 491 IPR036638 GO:0046983
Apr2g1203 629 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 427 476 IPR011598 GO:0046983
Apr2g1203 629 SMART finulus 433 482 IPR011598 GO:0046983
Apr2g1203 629 Pfam Helix-loop-helix DNA-binding domain 431 477 IPR011598 GO:0046983
Apr2g1203 629 PANTHER TRANSCRIPTION FACTOR TT8 3 625 - -
Apr2g1203 629 PANTHER TRANSCRIPTION FACTOR EGL1 3 625 - -
Apr2g1203 629 Coils Coil 466 493 - -
Apr2g1203 629 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 429 489 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1203 Apr-Chr2 18221689 18225687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1203 2 629 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 46.364 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g1203 bHLH-MYC_N 1.1e-51 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1203 - - gmx:100808167 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1203 2 18221689 18225687 Apr2g1203 2 18221689 18225687 ECH