Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1200 ATGATGCCTGTGTTGCAGTGCCTTGAGACCCTGAAAACTCATTTTGCTTATAATGCTGCCCGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGACCGGTCTGAACAAACATCCTTAGATGACACAGATAGTTGCTTCAAGGATGCTTCCAAATTGCAACAAGCTGTGGATGGTTCTGTTGTATCAGATGGAATCGGTTCCATATATCATATTGGAATAAAGTCTAACGAACTATTCCAGTTGAAGCAAGGATTGCATGTGGATCTTTCAGATGCCAAACTTAATGATGTGTTAAAATCAAACAGTTTGGATAGTGTCTCGACTCAATTGCTTTTTAATATAGGAAATAGGATCCTCAGTGATATCTTTGAAAGGAAGAATGGAGACGTACCTCAGCGTGCAGCATTCCTGTTGAGAAAAATTCTGCAAGTAATTGAGATGCGTTTTTCAAATCAAGCAGAAAGCATAAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAAACAAGAATAAATGCACTTGAAACCCTGGCGATAGGGACAACTGAAGAGAATGAGATTGTTACAAGTTGGGTTCAGCAGTTGAAGTTTGCTTTGCAGCATGAACAAGCAAAATTTGAGGAGAAGAAGAAACTTGAAGAACAGGATTTTTCTCGATTAAAGAAAGAAAAAGTTCGTAGTGAAATTGAAATTTCTGAATTGAAGCAAGATTTGGAAATAGCCAAAAGAACATATGAAGAACATGTTTCACAATTAGAATTGCAAGCTACTGAATCTAAAGCTGAATATGAGAAAAGGATAGAGGAACTTAAGCGTCATCTTGCAGATGCAAGGAAGCAAGTGAAAGAACTGGAGGCATTTTCAGAATCCAGATATTTGAATTGGAAGAATAAAGAGCATACCTATCAAACTTACGTTAATTACCAGTTTGGAGCTTTCCAGGAACTGAGAGCTTCCATGAAGTCTATAAAAAATGACGTGATAAAAACAAAAAGAAGCTACTTAGAGGAGTTCAAGTACTTTGGAATCAAGCTCAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATTTAGTTTTAGCAGAAAATAGGAAATTGTACAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTATATTGTCGAATTAGACCATTTCTTCCGGGGCAAAGTCAAAATCATACAACAATTGAGTTTGTTGGTGAAGATGGAGAACTAATTGTTAGCAATCCTCTTAAACAAGGAAAAGAGAGTCGCAAGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAGTAAGTCAAGAGGAAGTATTTAAGGACACTCAACCATTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACGGGCTCAGGAAAGACCTATACAATGAGTGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCTCTTCATGATCTTTTCCATATCTCCCAGAGTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCAAGCAATGAAAAATATACCAGGTATTGTTTCCTTGATTTGCACACACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCCAGTATGCATTCTGTGAATTCAATGACTGATGTTCTTGAGTTGATGACTGTTGGGTTGACAAATAGGGCAACCAGTGCCACAGCCTTGAATGAAAGAAGTAGTAGATCACACAGTGTTCTCTCTGTTCATGTTCGAGGAACGGATTTGAAGACCAACACGTTGTTGCGTGGATGTTTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCTGCACTTGGAGATGTGATATTTGCTCTAGCACAAAAGAGTTCACATGTGCCATATAGAAATAGTAAATTGACTCAACTTCTGCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTATAAGCACCTTGAAGTTTGCTGAAAGGGTTTCTGGTGTCGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTTAGAGAACTTATGGAGCAGATGGCATCTCTCAAGGATGCAATTGCAAGGAAGGATGAAGAGATTGAGCAGTTACAGTTGCTCAAGGCTAATCATAATAGTCCAAAGCTTGGTATGATCTCACTAAGACATGGATCGTCATCTCCAAGGAGACATTCCATAGGGACTCCCCGACATCGCATGAGACTTTCAGGAACAAGGAGCTTTGGAGTCAATGAAAAAGAAGCTTCTGACATGGATAACTGCTCGGAGTACAGTGATAAGCATTCAGAAGCTGGTTCTCATCAATCAATGGATGATTTTAGGAACAAGTCCAGCTCCCTGAGGTTGAAGTTACCTAGAGAAGATATCAATCAAAATTTAAATGAGGACATTGACCTCTTAAGATTTGGAGACGCAAATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGGCTTTCAATGGGAACTGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTTGAGAAGGCAGCTGAAATCACACCAGCTAAGGATGGCACAATCGACAACTTTCCAGCTGAGAGCACGGAAAAGCCCATTATGCCATCCAAAATTCCTAAAGCTTGTCAAGTCCTGCCAAGAGTGCAGACAAGGCCTTCTAGGCTATCATTGAACAAAAGCTCCTCGAAGGTTTTGTCAAGTATTAAAAAACCCACGGCCAGTAGCTCTTCTTCGGCGAAGCCCCTTAAACGATGGCAATAG 2931 0.3958 MMPVLQCLETLKTHFAYNAARENIQSCSRKRWDRSEQTSLDDTDSCFKDASKLQQAVDGSVVSDGIGSIYHIGIKSNELFQLKQGLHVDLSDAKLNDVLKSNSLDSVSTQLLFNIGNRILSDIFERKNGDVPQRAAFLLRKILQVIEMRFSNQAESIKNQNNLFKAREGKYQTRINALETLAIGTTEENEIVTSWVQQLKFALQHEQAKFEEKKKLEEQDFSRLKKEKVRSEIEISELKQDLEIAKRTYEEHVSQLELQATESKAEYEKRIEELKRHLADARKQVKELEAFSESRYLNWKNKEHTYQTYVNYQFGAFQELRASMKSIKNDVIKTKRSYLEEFKYFGIKLKGLAEAAENYHLVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNHTTIEFVGEDGELIVSNPLKQGKESRKLFKFNKVFGQAVSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQSRRSSIVYEVGVQMVEIYNEQVRDLLSSNEKYTRYCFLDLHTLGIWNTAQPNGLAVPDASMHSVNSMTDVLELMTVGLTNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQMASLKDAIARKDEEIEQLQLLKANHNSPKLGMISLRHGSSSPRRHSIGTPRHRMRLSGTRSFGVNEKEASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLPREDINQNLNEDIDLLRFGDANSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAEITPAKDGTIDNFPAESTEKPIMPSKIPKACQVLPRVQTRPSRLSLNKSSSKVLSSIKKPTASSSSSAKPLKRWQ* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1200 976 SMART kinesin_4 377 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 MobiDBLite consensus disorder prediction 939 976 - -
Apr2g1200 976 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 976 - -
Apr2g1200 976 PRINTS Kinesin heavy chain signature 454 475 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 PRINTS Kinesin heavy chain signature 585 602 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 PRINTS Kinesin heavy chain signature 616 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 PRINTS Kinesin heavy chain signature 665 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 Coils Coil 729 759 - -
Apr2g1200 976 Coils Coil 207 291 - -
Apr2g1200 976 MobiDBLite consensus disorder prediction 764 832 - -
Apr2g1200 976 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 976 - -
Apr2g1200 976 MobiDBLite consensus disorder prediction 801 832 - -
Apr2g1200 976 Pfam Kinesin motor domain 385 713 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr2g1200 976 Gene3D Kinesin motor domain 321 717 IPR036961 -
Apr2g1200 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 753 IPR027417 -
Apr2g1200 976 ProSiteProfiles Kinesin motor domain profile. 379 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1200 Apr-Chr2 18192652 18199302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1200 347 749 Calmodulin-binding Proteins AT5G65930 39.512 1.22e-72 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1200 K10406 - gmx:100812813 1637.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1200 2 18192652 18199302 Apr2g1200 2 18192652 18199302 ECH