Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1193 ATGGGTTGTGACTTTTCTAAGTACTCGGCATGCTGCTGGGGTACACAGCAAAATGGTCCAGTTCCTCAGGCTCATGTTGATGAAAATGCAGACAACATTGAGGGCTTTGACCTGCCGTGGTTTCATGAATTTACAATCGATCAGCTTAGGAGGGCTACATCTGGATTTGCAGTTGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTCTATAAAGGTAGACTTGATAATCAGATGCGAATTGCTGTCAAACGGTTCAACAAGAATGCTTGGCCAGATGCTCAACCATTTTTGGAGGAGGCCAGGGCTGTTGGTCACCTGAGGAACCAAAGATTGGCAAATCTGATAGGATGTTGCTGTGAAGGTGAAGAGAGGTTACTCGTTGCTGAATATATGCCCAATGATACTTTGGCAAAGCATTTGTTCCATTGGGAAACTCAGCCCATGAAATGGGCAATGCGAATGAGAGTTGCTTTGCACCTTGCTGAAGCTCTAGAGTACTGTACCATCAAAGGACGTGCACTATATCATGATCTAAATGCTTACAGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCTTGCTTCGGTCTGATGAAAAATAGTCGAGATGGGAAAAGTTATAGTACGAATTTGGCATTTACTCCACCTGAGTATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGTACCCTCTTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTTGACCTGATTAGAGACAAGAACCTTCAGACGCTATCAGACTCTTGTTTAGAAGGACAATTTTCAAATGATGAGGGAACTGAGTTAGTGCGCCTAGCCTCACGATGTTTGCAATCCGAACCCCGAGAGCGTCCTAATCCGAAGTCACTGGTCACTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTGCTGATGGGTATACCAGATGGTACTGCAGCTTTTCCCCTTTCTCCGCTTGGGGAGGCTTGTCTACGAATGGATCTGACTTCCATACATGAAGTGTTGGAAAAAATCGGGTATAAAGATGATGAGGGTGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACATTGAACTCGAAGAAAAAAGGGGATGCCGCTTTCCGGCACAAGGACTTCAAAACTGCAATCGATAGCTATACAGTGTTCATTGATGTTGGAACCATGGTTTCTCCAACAGTTTATGCACGTCGTAGTCTATCTTATCTCATGAGCAATATGCCAGATGAAGCACTTAATGATGCAATGCAAGCACAAATAATATCCCCGGTTTGGTACATTGCATTTTATTTACAAGCCGTTGCTCTCTTAGCACTGGGCAAGGAGAATGAGGCCCAAGTGGCTCTGAAAGAGGGTTCTTCACTTGAAACTAAAAAGAACCCAAATTAG 1464 0.4392 MGCDFSKYSACCWGTQQNGPVPQAHVDENADNIEGFDLPWFHEFTIDQLRRATSGFAVENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNKNAWPDAQPFLEEARAVGHLRNQRLANLIGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMKWAMRMRVALHLAEALEYCTIKGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQTLSDSCLEGQFSNDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTSIHEVLEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTVFIDVGTMVSPTVYARRSLSYLMSNMPDEALNDAMQAQIISPVWYIAFYLQAVALLALGKENEAQVALKEGSSLETKKNPN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1193 487 Gene3D Tetratricopeptide repeat domain 380 487 IPR011990 GO:0005515
Apr2g1193 487 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Apr2g1193 487 SUPERFAMILY Protein kinase-like (PK-like) 36 319 IPR011009 -
Apr2g1193 487 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 487 IPR045845 GO:0004672|GO:0009742
Apr2g1193 487 Gene3D Phosphorylase Kinase; domain 1 34 134 - -
Apr2g1193 487 SUPERFAMILY TPR-like 386 480 IPR011990 GO:0005515
Apr2g1193 487 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1193 487 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Apr2g1193 487 PANTHER TPR DOMAIN KINASE 1 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1193 Apr-Chr2 18135141 18145145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1193 44 335 Glycoside Hydrolase AT3G07070 33.438 1.16e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Apr2g1193 PK_Tyr_Ser-Thr 3.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1193 K14500 - gmx:100797107 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1193 2 18135141 18145145 Apr2g1193 2 18135141 18145145 ECH