Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1192 ATGGATGGGAGAGAAGCTATGGCGTTCTCTGGTGGCCCAGCTTCATATTACATGCATAGAGGAGACGTTGTAGGGTCTGGTTCTGGAACACAGGCTGGGGGAGGGGGGTTCCAAGCTTCACCTGGGTTCAGAGCTTTGTCAAATGCTGGCATTCCAGTTCAGTCCAATGCTAGGGCTCAGGGTGGTTCTGTAGGTTCCAGTTCCACATTTCCAGTGGAGCCTCCTCAGGCTCATGCCAATTTTAATCATGGCATTGGCATTGGTGCCCCTCCAGGGGCAACCTCAAGTGAGCCTGTGAAAAAGAAAAGAGGGAGACCTCGAAAATATGGTCCTGATGGACCAGTTTCTTTGAGACTGTCTCCAATGTCTGCCCCTCCTAATTCTGCACAGGGTTCAACCACACCTTCTCAGAGGCGCGGTAGAGGGCGCCCACCAGGATCTGGAAGGAAGCAACAGCTGGCTGCTTTAGGTGAATGGATGAATAGTTCAGCAGGATTGGCCTTTTCACCTCATGTTGTCACCATTGGAGTTGGAGAGGACATTGTGGCTAAGTTGTTGTCCTTATCACAGCAGAGACCAAGGGCTCTGTGCATCTTGTCAGGCACTGGGACAGTTTCTTCCGTTACTCTGCGACAGCCTGCTTCTACCAATGCGAGTGTAACTTATGAGGGACGATTCCAAATATTATGCTTGTCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCCCCCAATAGAACTGGTGGCATTAGTGTTTCACTTTCTAGCCCTGATGGTCATGTTATTGGTGGAGGCGTTGCTGTACTTATTGCTGGAAGCCCAGTGCAGGTAGTATTGTGCAGTTTTGTGTATGGTGGCTCAAAGACCAAGACTAAACAAGTGACAGCTAACAATGATGAAAGTTCTGAGCCTCAGGACAGTGATAAGTTAGCTTCTCCAGCCAGTGCCCCTCCTATTCAAAACTACATCCCTTCTGCAACAAACATTTGGCCTGTATCACGACCGGGAGACCTGAAAAGTGCGCACACACATACCGGCATTGACTTGACTCGCGGATGA 1059 0.4976 MDGREAMAFSGGPASYYMHRGDVVGSGSGTQAGGGGFQASPGFRALSNAGIPVQSNARAQGGSVGSSSTFPVEPPQAHANFNHGIGIGAPPGATSSEPVKKKRGRPRKYGPDGPVSLRLSPMSAPPNSAQGSTTPSQRRGRGRPPGSGRKQQLAALGEWMNSSAGLAFSPHVVTIGVGEDIVAKLLSLSQQRPRALCILSGTGTVSSVTLRQPASTNASVTYEGRFQILCLSGSYLVAEDGGPPNRTGGISVSLSSPDGHVIGGGVAVLIAGSPVQVVLCSFVYGGSKTKTKQVTANNDESSEPQDSDKLASPASAPPIQNYIPSATNIWPVSRPGDLKSAHTHTGIDLTRG* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1192 352 MobiDBLite consensus disorder prediction 121 140 - -
Apr2g1192 352 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 283 IPR005175 -
Apr2g1192 352 CDD DUF296 170 282 IPR005175 -
Apr2g1192 352 MobiDBLite consensus disorder prediction 55 75 - -
Apr2g1192 352 MobiDBLite consensus disorder prediction 291 328 - -
Apr2g1192 352 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 352 IPR039605 GO:0003680
Apr2g1192 352 ProSiteProfiles PPC domain profile profile. 162 303 IPR005175 -
Apr2g1192 352 MobiDBLite consensus disorder prediction 333 352 - -
Apr2g1192 352 MobiDBLite consensus disorder prediction 55 152 - -
Apr2g1192 352 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 352 - -
Apr2g1192 352 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 284 - -
Apr2g1192 352 Gene3D - 170 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1192 Apr-Chr2 18124104 18128239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1192 1 352 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.964 1.77e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1192 - - gmx:100798706 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1192 2 18124104 18128239 Apr2g1192 2 18124104 18128239 ECH
Apr7g0594 7 12474197 12478491 Apr2g1192 2 18124104 18128239 PCT