Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1183 ATGAAGTTATGTACTTCATTGTTGTTACTAGGTTTGTTTTCCACGCTCTCTTTTGTGGCTTCTGATATGGTGCCCTCAAATGAAGTTTGGGCTCTCACGACTTTCAAGGAAGCTGTGTTTGAAGATCCACACATGGTTTTGTCCAATTGGAATACTCTGGATTCAGATCCTTGTGGTTGGGGTGGTATTTCTTGCACTGCTACTCGAGATCATGTCATCAAGCTCAACATATCAGGGTCATCGTTAAGGGGGTTTCTTGCTCCAGAATTTTGGAAAATCACCTACTTAGAAGAACTGATCTTGCATGGAAACAATCTCATTGGAATAATACCTAAAGAATTGGGCATGTTAAAATCTCTTAAGGTGTTGGATTTGGGAATGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGCAAATTTGACCCAAGTTGTAAAAATAAATCTGCAGTCCAACGGGTTGGCTGGTAGACTACCTCCAGAGCTAGGAAATTTGAAATACCTGCAAGAACTTAGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCAGGTGGCACTTCAAATTTTTCTTCAAATATGCATGGCATGTATGCCTCAAAAGCTAATTTGACTGGCTTCTGTCGTTCGTCTCAGTTAAAAGTTGCGGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGAGTATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTCCACACCAAAGGCGTAAAACAGCGGACTTCTCTGCAATGTGCTGGTGCTTCACCTGCCCAAGGCCGTTCAGTAATGAATCCAAAAAATCAACCTGTGACTAAACATTTGTCCAAGGATCATGGAGCATCAAAACCTACTTGGCTTTTAGCTCTAGAAATAGTGACAGGAACCATGGTGGGTTCTCTCTTTCTGATAGCCATTCTAACTGCATTCCAGAGGTGTAACAACAAATCATCTATCATTATTCCATGGAAAAAATCTGCAAGCGAAAAAGATCATACTGCAATATATATAGACTCTGAGATGTTGAAGGATGTGATGCGGTATAGTAGACAAGAGCTTGAAGTGGCCTGTGAAGATTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGAATTGGACAGGATACCTTGATCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCACGATAATACGGGAAAGCTTCTAGGATATTGTAGAGAGAGCACTCCATTTACAAGAATGCTGGTTTTTGAGTATGCGTCAAATGGGACACTTTATGAACACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCTTGGACACGGCGTATGAAAATTATCATTGGCATTGCACGTGGACTCAAGTATTTGCACACTGAAATTGAGCCGCCATTCACTATCTCAGAGTTGAATTCCAATGCTGTATACCTTACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAAAATTCTGGTTCTGTTAGCAGCCAAGGTGCTGTTTGTCTTCTACCAAACTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATTTATGCCTTTGCAATACTACTACTGGAGATTATCAGTGGCAGACCTCCATACTGCAAGGAAAAAGGGTACTTGGTGGATTGGGCCAGGGAGTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTTAGATATGAAGACCTCAAAGTAATATGTGAGGTGATAACTCTTTGTATCAGTCCCGATCCCTCTGCGTGTCCATCAATGCGAGAATTATGCAGCATGCTTGAGAGCAGAATAGTCACATCCATTAGCGTGGAGCTCAAGGCATCATCTTTGGCTTGGGCTGAACTAGCACTTTCATCATAA 1989 0.4158 MKLCTSLLLLGLFSTLSFVASDMVPSNEVWALTTFKEAVFEDPHMVLSNWNTLDSDPCGWGGISCTATRDHVIKLNISGSSLRGFLAPEFWKITYLEELILHGNNLIGIIPKELGMLKSLKVLDLGMNQLSGPIPPEIANLTQVVKINLQSNGLAGRLPPELGNLKYLQELRLDRNKLQGPVPAGGTSNFSSNMHGMYASKANLTGFCRSSQLKVADFSYNFFVGSIPKCLEYLPRSSFQGNCLHTKGVKQRTSLQCAGASPAQGRSVMNPKNQPVTKHLSKDHGASKPTWLLALEIVTGTMVGSLFLIAILTAFQRCNNKSSIIIPWKKSASEKDHTAIYIDSEMLKDVMRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEENWTGYLDLYFQREVADLARLNHDNTGKLLGYCRESTPFTRMLVFEYASNGTLYEHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSVSSQGAVCLLPNSLEARHLDTKGNIYAFAILLLEIISGRPPYCKEKGYLVDWAREYLEMPEVMSYVVDPELKHFRYEDLKVICEVITLCISPDPSACPSMRELCSMLESRIVTSISVELKASSLAWAELALSS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1183 662 Gene3D Ribonuclease Inhibitor 141 264 IPR032675 -
Apr2g1183 662 MobiDBLite consensus disorder prediction 260 283 - -
Apr2g1183 662 Pfam Protein tyrosine and serine/threonine kinase 367 635 IPR001245 GO:0004672|GO:0006468
Apr2g1183 662 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Apr2g1183 662 Gene3D Transferase(Phosphotransferase) domain 1 445 649 - -
Apr2g1183 662 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1183 662 SUPERFAMILY L domain-like 27 235 - -
Apr2g1183 662 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 662 - -
Apr2g1183 662 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Apr2g1183 662 MobiDBLite consensus disorder prediction 260 276 - -
Apr2g1183 662 SUPERFAMILY Protein kinase-like (PK-like) 342 637 IPR011009 -
Apr2g1183 662 PANTHER PROTEIN MALE DISCOVERER 2 7 662 - -
Apr2g1183 662 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Apr2g1183 662 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1183 Apr-Chr2 18079283 18083744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1183 1 642 Receptor kinase-like Gene Family AT2G35620 29.072 1.23e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Apr2g1183 PK_Tyr_Ser-Thr 5.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1183 - - gmx:100779744 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1183 2 18079283 18083744 Apr2g1183 2 18079283 18083744 ECH
Apr7g0601 7 12541356 12546307 Apr2g1183 2 18079283 18083744 PCT