LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr2g1162	ATGGAGAAACATCAAGTTTTGTTCCCTACCTCTTCTTCACCGTCTACTTCTCCATTCGGTGATCATATTTCTATTGGGGCTGTTAAAAAGGATGATTTTTTAAAAACTCAAAGGCCAAGCCAGAAAGGTGGCAAAGAAATGAAGCAGCATAGATATGTGTTTCAAACAAAGAGCCAGATTGATATACTGGATGATGGGTACCGGTGGAGAAAGTATGGAGAAAAATCCGTGAAAAACAATAAATTCCCTAGAAGTTACTACAGATGCTCATATCGAGGTTGCAATGTAAAGAAACAAATCCAACGTAGTTCCAAGGATGAAAAGATCGTAGTAACATCCTACGAAGGGATGCATACTCATCCTGTCGAGAAATCAGCTGAAAGCTTCGATCAGATCTTGAGAAACTTTCACGTATACAACCAACTGTCCAACTATATAATGTAA	444	0.3851	MEKHQVLFPTSSSPSTSPFGDHISIGAVKKDDFLKTQRPSQKGGKEMKQHRYVFQTKSQIDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRSSKDEKIVVTSYEGMHTHPVEKSAESFDQILRNFHVYNQLSNYIM*	148

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr2g1162	147	Pfam	WRKY DNA -binding domain	64	121	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Apr2g1162	147	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	1	139	IPR044810	GO:0003700
	Apr2g1162	147	MobiDBLite	consensus disorder prediction	1	20	-	-
	Apr2g1162	147	Gene3D	WRKY domain	47	123	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Apr2g1162	147	PANTHER	WRKY FAMILY TRANSCRIPTION FACTOR	1	139	-	-
	Apr2g1162	147	SUPERFAMILY	WRKY DNA-binding domain	55	122	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Apr2g1162	147	MobiDBLite	consensus disorder prediction	1	21	-	-
	Apr2g1162	147	SMART	WRKY_cls	63	122	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Apr2g1162	147	ProSiteProfiles	WRKY domain profile.	58	123	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr2g1162	Apr-Chr2	17875246	17875859	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr2g1162	51	142	WRKY Transcription Factor Family	AT5G13080	67.391	1.07e-47	149

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Apr2g1162		WRKY	1.6e-25	CL0274