Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1142 ATGGGTTGCGCGCTTGGAACGCCGGTGGTTTCCGACGACCGTCGCCGGGACAACACTGCGACTGCTGACGAAGGCAATAATGCTGCTAGGGTTCGGCAGAAGCAGAAGACTCCGCACGCCGGCGAACCTTCTGGCGTGATTCCGGCGCCGGAGCGCCGAATACCTCGCCTTGAACGATTTACGGCAACCCCCCAGGGCTGGCCGCCGTGGTTGTTGGCCGTCGCCGGCGACGCAATCCGAGATTGGACTCCTCGCCGCGCCAACACGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGCAATGTGTATAAAGCTAGGGACCTTGTTACTGGGAAGATAGTGGCTTTGAAGAAAGTTAGATTTGATAATTTGGAGGGAGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTTGTTTTGAGGAAGCTTGATCACCCCAATGTTGTTAAGCTTGAGGGTTTGGTTACTTCTAGAATATCATCAAGTCTTTACTTGGTATTTGATTACATGGAGCATGATCTTGCTGGCCTTTCAGCTGGCCTAGCTGTCAAGTTCTCTGAGCCTCAGGCCAAATGCTATATGAAGCAATTGCTGTCTGGCCTTGAACATTGCCACAGCCGAGGTGTTTTGCACCGTGATATTAAGGGTTCCAATCTGCTTATTGACAATGAAGGAATACTTAAAATTGCAGATTTTGGATTGGCAACTTTCTATGATTCTAAGCAAAAGCATCCCATGACTAGTAGAGTTGTGACCCTATGGTATCGCCCCCCTGAGCTTCTTCTTGGGGCTACATCCTATGGTGTTGGCATCGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAACTGCTTGCTGGAAAGCCAATCATGCCTGGACGAACAGAGGTTGAGCAGCTGCACAAAATATTTAAGTTATGCGGCTCTCCATCTGAGGCATATTGGAAAAAATATAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAACCGTATAAAAGATGCATCTTAGAAATGTTCAAGGACTTCCCATCTTCTTCATTACCTCTAATTGAAACTCTTCTTGCAATAGATCCTGATGATCGTGGCACTACCTCAGATGCTATAAATAGTGAATTCTTTACCACCGAGCCCTATGCTTGTGAACCATTGAGTTTACCAAAGTATCCTCCCACCAAAGAATTGGATGTAAAATTGAGAGACGAAGAAGCAAGAAGGCAGAAAGCTCTAAGTGGAAAAGGTAATGCAGTAGATGGTGCCAGAAGAGTTAGAGTACGTGAGCGTAGTTTGGCCATTCCGGCCCCAGAAGCCAATGCAGAGATCCAAACGAACTTAGATAGGTGGAGAGTTGTAAATCATGCAAATGCAAAAAGCAAGAGTGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCAACGGATGCATCAAATAACGGAGCTGTTTCTTTTGGAGCCACTGAAACTTCCTCTGGCTCAACCATATTTGATTCAAAACCTTCTGGTTCTGTTGTGAGTCATGCTGCCAGAGACAAAGGGAGGAAAACTAATAAAGAAGATTCCAAGATGACCTCGTCATGGAAATTTATGCGTGCATTCAAGCTATCAACAAAAACAATTGGTCATTCATTTGATTTATTATTTAGAAGCAAATAG 1662 0.4591 MGCALGTPVVSDDRRRDNTATADEGNNAARVRQKQKTPHAGEPSGVIPAPERRIPRLERFTATPQGWPPWLLAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNLEGESVKFMAREILVLRKLDHPNVVKLEGLVTSRISSSLYLVFDYMEHDLAGLSAGLAVKFSEPQAKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDSKQKHPMTSRVVTLWYRPPELLLGATSYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEAYWKKYRLPNATLFKPQQPYKRCILEMFKDFPSSSLPLIETLLAIDPDDRGTTSDAINSEFFTTEPYACEPLSLPKYPPTKELDVKLRDEEARRQKALSGKGNAVDGARRVRVRERSLAIPAPEANAEIQTNLDRWRVVNHANAKSKSEKFPPPHQDGAVGYPTDASNNGAVSFGATETSSGSTIFDSKPSGSVVSHAARDKGRKTNKEDSKMTSSWKFMRAFKLSTKTIGHSFDLLFRSK* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1142 553 MobiDBLite consensus disorder prediction 474 503 - -
Apr2g1142 553 MobiDBLite consensus disorder prediction 456 524 - -
Apr2g1142 553 ProSiteProfiles Protein kinase domain profile. 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1142 553 Gene3D Transferase(Phosphotransferase) domain 1 173 413 - -
Apr2g1142 553 MobiDBLite consensus disorder prediction 510 524 - -
Apr2g1142 553 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 62 512 - -
Apr2g1142 553 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Apr2g1142 553 Pfam Protein kinase domain 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1142 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Apr2g1142 553 CDD STKc_CDK9_like 90 374 - -
Apr2g1142 553 SMART serkin_6 90 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1142 553 PANTHER CELL DIVISION PROTEIN KINASE 62 512 - -
Apr2g1142 553 SUPERFAMILY Protein kinase-like (PK-like) 83 379 IPR011009 -
Apr2g1142 553 MobiDBLite consensus disorder prediction 1 49 - -
Apr2g1142 553 Gene3D Phosphorylase Kinase; domain 1 76 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1142 Apr-Chr2 17679494 17683678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1142 82 408 Core Cell Cycle Gene Families AT5G10270 50.437 2.60e-115 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr2g1142 Pkinase 1.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1142 K08819 - gmx:100789359 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1142 2 17679494 17683678 Apr2g1142 2 17679494 17683678 ECH