Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1141 ATGGATGATGGCCGCTCACGTGAAAATGGTAGGCATAAGATGGAATACTACAGAGGAGCACATTCCCTGTGGAATACAGATACCCAGCATCAAGTAAAGGAGCCAAATGCACTGGTTATGAATAAGAAAATTAGGTCCATTATGGCTGAGAGGCAGGCTGCCATTCTAGAACTTGAATTAGAAGCTGCTATATCTGAAAAGAACGAAGCCTTGGCTGCTCGAGATGCAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTATTGGAGCGGGATAATGCCCTTGCAGCCCTTCAAAATCGGAGCAATGCTGTCAACTTCCCATTTGGCGCTGGAATTCAACGTGGATCAAAGCGGATGCACCATTCTTCCAACCATCTATCTAACATGACAGAAGCTGCATACAGCACAAAGGATATGATAATAAGGGATGCCTCCCCAGTGACTGTTATACCTTCTGAAGGTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTTATTAACTCCAAGGCATCAAAGCCACCTAGCAAAGTAAAGAAAATGGGTGAGGATTTAAATAGGCAGGCATCTTCTGAAGGGACAAAGTTCAGATCTGAATGGGATAGGCAGGATGTTGGCTTGAATTTGGTTGCGTTTGATGAAACCATCATGCCGGTCCCAGTTTGCACATGCACCGGAGTACCACGACAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCATCTTGTTGTACCACCACATTGTCAATGTATCCACTACCACAGCTTCCACACAAGCGCCATGCCCGCATTGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACACGGCTTCTCAGTAGGTTGGCATCAGAAGGGCATGATTTGTCTATACCATTGGATCTTAAGGAATACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 954 0.4623 MDDGRSRENGRHKMEYYRGAHSLWNTDTQHQVKEPNALVMNKKIRSIMAERQAAILELELEAAISEKNEALAARDAALRQRDEALAQRDNALLERDNALAALQNRSNAVNFPFGAGIQRGSKRMHHSSNHLSNMTEAAYSTKDMIIRDASPVTVIPSEGVKSHQAKRTKENKVINSKASKPPSKVKKMGEDLNRQASSEGTKFRSEWDRQDVGLNLVAFDETIMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPHKRHARIGGRKMSGSVFTRLLSRLASEGHDLSIPLDLKEYWARHGTNRYITIK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1141 317 Coils Coil 53 94 - -
Apr2g1141 317 PANTHER - 1 317 IPR010409 -
Apr2g1141 317 Pfam GAGA binding protein-like family 1 317 IPR010409 -
Apr2g1141 317 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 317 - -
Apr2g1141 317 MobiDBLite consensus disorder prediction 159 204 - -
Apr2g1141 317 SMART GAGA_bind_2 1 317 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1141 Apr-Chr2 17672453 17677387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1141 1 317 BBR or BPC Transcription factor family AT2G21240 56.740 6.30e-125 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Apr2g1141 GAGA_bind 1.3e-100 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1141 - - gmx:100813103 568.54