Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1133 ATGATGAAATTGCCAACATGGAGAACCATGGCAATGACTGTGGTGTTGCTTCAGCTGAGTACCTTGAAGATCTTCTGTCTCTCTTCTCATGCAGATAGAATTGTTGGGCTTCCTGGGCAACCTCAAGTAGGCTTCCAACAGTTCTCAGGTTATGTTACAGTGGATGACATGCATCACAAGTCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCAGCCTCAAAGCCTCTTGTACTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTCTGGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCTAATGGGGAAGTTTTGATTAAAAATGAGTACAGTTGGAACAAAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCTTCCTACAAGACTGTGAATGATAAGACTACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCCCAATACAGACACAAGGATTTGTTTCTAACTGGTGAAAGTTATGCAGGACATTATATTCCACAACTTGCCAAGCTCATGATTGAAATAAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCATTGGGTAATCCAGTACTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGGTTGATATCAGATTCAACGTACAAAATGTTCACTACCGGTTGTAATTATTCCCGGTATGTCAGTGAATACTATCGAGACTCAATTTCACCTCTTTGTTCGAAGGTTATGAGCCAAGTAAGCAGAGAAACAAGTAAGTTTGTGGACATATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTTTCACAGTCTAAAGTTATTTGTCCTCAAACCCAACAAGCAAATGAGAGTACTATAGATGTTTGTGTAGATGACAAAGTTACAAATTACTTAAATCGACATGATGTACAAGAATCTCTCCATGCCAGGCTTGTTGGAGTTCGAAAGTGGGATGTTTGTAGCAACATTCTGGACTATGATATGCTAAATCTGGAAGTACCTACGCTACCTGTAGTTGGATCACTTATAAGAGCTGGAATTCGGGTCCTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTGGTTCAAAAGCTGGCAAGACAACTAGGACTGAATACAACTGTTCCTTATAGAGTATGGTTCGAAGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCTACAGTCAGAGGTGCATCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGATAGACCCCTACCTGAATTTTTCTGA 1401 0.4133 MMKLPTWRTMAMTVVLLQLSTLKIFCLSSHADRIVGLPGQPQVGFQQFSGYVTVDDMHHKSLFYYFVESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNKETNMLYLETPVGVGFSYAKGGSSYKTVNDKTTARDNLVFLQRWFNKFPQYRHKDLFLTGESYAGHYIPQLAKLMIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTTGCNYSRYVSEYYRDSISPLCSKVMSQVSRETSKFVDIYDVTLDVCISSVLSQSKVICPQTQQANESTIDVCVDDKVTNYLNRHDVQESLHARLVGVRKWDVCSNILDYDMLNLEVPTLPVVGSLIRAGIRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEFF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1133 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Apr2g1133 466 PANTHER CARBOXYPEPTIDASE 26 464 - -
Apr2g1133 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 464 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Apr2g1133 466 SUPERFAMILY alpha/beta-Hydrolases 36 463 IPR029058 -
Apr2g1133 466 Gene3D - 360 458 - -
Apr2g1133 466 Pfam Serine carboxypeptidase 38 458 IPR001563 GO:0004185|GO:0006508
Apr2g1133 466 Gene3D - 314 350 - -
Apr2g1133 466 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1133 Apr-Chr2 17593495 17596284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1133 322 462 Calmodulin-binding Proteins AT2G22960 28.369 9.11e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1133 K16297 - gmx:100800002 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1133 2 17593495 17596284 Apr2g1133 2 17593495 17596284 ECH