Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1126 ATGGATTCTCAAGCACTTAACTTGTTAGCCCTTTTATCCTTTTTCCTCTTCATGATTGTGCTGCTGAAGATAGGGAGGAATCTCAACAAAAATAAGTCAACTACTAAAATACCCCCAGGACCATGGAAGCTACCCATTATAGGAAACATACCCCATTTTGTAACATCTACACCACATAGAAAACTAAGAGACTTGGCCAAAATATATGGACCCTTAATGCATCTGCAACTTGGGGAGATCTTCACAATCATTGTTTCCTCACCAGAGTATGCTAAGGAGGTGATGAAAACTCATGACGTCATCTTCGCATCAAGGCCTCAAACTTTAGCTTCAGATATATTGTCCTATGGATCCACAAATATTATTGTAGCACCTTATGGAAATTATTGGAGACAACTACGAAAGATATGCACAGTAGAGCTTTTCACCCAAAAACGTGTGAATTCATTCAAGCCAATAAGAGAAGAAGAGCTCACCAGTCTCATCAAAATGATTGATTCACATGATGGGTCACCCATCAACCTCACTGAAGCAGTACTTTTATCAATATACAATATCATTTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCAGTTGTGAAAGAAGCAATAAGAGTTGGAGGAGGTTTTAGCATAGGTGAATTGTTTCCTTCTTCTAAATGGCTTCAACTTGTTACTGGTTTGAAGCCTAAGCTTGAGAAGTTGCATAGCAAAATGGATCAGATACTAGAAGACATCATTGTTGAACATAAGGACGAAAAGTCAAAAATCAAAGAAGGCCAACGTGAAGCAGAGGAAGATCTGGTAGATGTTCTCCTAAAATTCCAGGATGGTAGTCAGGATATTTGCTTGACTAATAACAATGTAAAGGCTATAATCCTGGACATATTTGGTGCTGGAGGTGAGACAGCAGCAACTACCATAAATTGGGCAATGGCAGAGATAGTAAGTGATCCAAGAGTAATGAAGAAAGCACAAGTTGAGGTGAGAGAGGTATTCAATATGAAAGGAATGGTTGATGAAGTTCTCATTGATGAACTCAAATATTTGAAATCAGTAGTCAAAGAGACCTTAAGGCTACACCCTCCAGCTCCTCTTTTAATTCCAAGAGAAAATGGACAAGCATGTGAGATTCATGGTTATCACATACCTATCAAAAGCAAGGTAATTGTAAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGAGTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGTTCTATTGATTACAAGGGGAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGCAGCACATTTGGTTTAATAAATGTTGAGTTGGCCCTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGGGAAGTGAGGAGTTGGACATGACTGAGGAATTTGGAGTGACTGTTAGAAGAAAAGATGATCTATACTTGATACCTATTTCTTCTTACCCTTTTCAATAA 1518 0.3827 MDSQALNLLALLSFFLFMIVLLKIGRNLNKNKSTTKIPPGPWKLPIIGNIPHFVTSTPHRKLRDLAKIYGPLMHLQLGEIFTIIVSSPEYAKEVMKTHDVIFASRPQTLASDILSYGSTNIIVAPYGNYWRQLRKICTVELFTQKRVNSFKPIREEELTSLIKMIDSHDGSPINLTEAVLLSIYNIISRAAFGMKCKDQEEFISVVKEAIRVGGGFSIGELFPSSKWLQLVTGLKPKLEKLHSKMDQILEDIIVEHKDEKSKIKEGQREAEEDLVDVLLKFQDGSQDICLTNNNVKAIILDIFGAGGETAATTINWAMAEIVSDPRVMKKAQVEVREVFNMKGMVDEVLIDELKYLKSVVKETLRLHPPAPLLIPRENGQACEIHGYHIPIKSKVIVNAWAIGRDPNYWSEPERFYPERFIDSSIDYKGNNFEYIPFGAGRRICPGSTFGLINVELALAFLLYHFDWKLPNGMGSEELDMTEEFGVTVRRKDDLYLIPISSYPFQ* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1126 505 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 501 - -
Apr2g1126 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Apr2g1126 505 PANTHER CYTOCHROME P450 71B11-RELATED 8 501 - -
Apr2g1126 505 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 Gene3D Cytochrome P450 30 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr2g1126 505 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1126 Apr-Chr2 17517400 17519997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1126 11 498 Cytochrome P450 AT3G26300 42.169 9.03e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1126 - - gmx:102665189 834.713