Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1091 ATGGAAAAGTACGAGGCCGTTAAGGATTTGGGAGCTGGCAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAACTCGTTGCCATGAAATACATCGAACGAGGCCACAAGATTGATGAGAATGTGGCTCGCGAGATTATCAATCACAGGTCTCTTCGTCACCCCAATATAATTCGTTTCAAGGAGGTGGTTTTGACCCCTACTCATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGAGAGCTATTTGAGAGGATATGCAATGCTGGAAGGTTTAGTGAAGATGAGGCTAGATATTTCTTTCAACAGCTGATTTCTGGTGTCCATTACTGTCATGCCATGCAAATATGCCACAGGGATTTGAAGCTAGAAAATACCCTCTTAGATGGAAGTCCTGCACCCCGCTTGAAAATTTGTGACTTTGGCTATTCCAAGTCGTCTTTGCTTCATTCACGACCCAAATCAACTGTGGGAACTCCAGCTTATATAGCACCAGAAGTTCTTTCTAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGAGTGACGCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGATCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTCCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGAGAGTTACTCTTAAGGAAATCAAAAACCACCCTTGGTTTTTGAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTGTCTATTACCAGAGAGGCAACCCAAGCTTTTCAGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAGGCAAGGGACCCTCCTCCAGTATCCAGGCCGGTCAAAGGTTTTGGCTGGGACGGTGAAGAAGATGAAGGAGAAGAAGATGTGGAAGAAGAGGAGGAGGAAGAAGATGAGTATGACAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTTCAAATCAGTTAA 1056 0.4384 MEKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRVTLKEIKNHPWFLKNLPRELTESAQAVYYQRGNPSFSVQSVEEIMKIVGEARDPPPVSRPVKGFGWDGEEDEGEEDVEEEEEEEDEYDKRVKEVHASGEFQIS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1091 351 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Apr2g1091 351 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1091 351 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Apr2g1091 351 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 344 - -
Apr2g1091 351 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1091 351 Coils Coil 318 345 - -
Apr2g1091 351 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1091 351 MobiDBLite consensus disorder prediction 300 351 - -
Apr2g1091 351 CDD STKc_SnRK2 3 259 - -
Apr2g1091 351 MobiDBLite consensus disorder prediction 316 335 - -
Apr2g1091 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Apr2g1091 351 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Apr2g1091 351 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Apr2g1091 351 PANTHER SERINE/THREONINE KINASE 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1091 Apr-Chr2 17253406 17257201 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1091 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 43.015 2.60e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Apr2g1091 Pkinase 4.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1091 K14498 - gmx:547968 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1091 2 17253406 17257201 Apr2g1091 2 17253406 17257201 ECH