Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1078 ATGAAGGTGAAGAAGGGGTGGCTCGCAGTTCAAGTGGAAGAGGAATCAGAAGAGGGTGGAAGTAACTCTCAAAGATTTGAGATCCCAATTTCTTATCTTTATCATCCTCTTTTCAAGGGTCTTCTTGACAAAGCTTATGAGGTTTATGGCTATCACCCAGAGGGTCCCCTTAAATTGCCATGTTCAGTTGATGACTTTCTTCATCTTCGTTGGAGAATCGAGAAAGAATCCATACCCCATCATCATAATCATCATCACCATCACCATCATCACCATGATCATCATCATCGCCAACTTCCTCACGCCTTGTATTTCCACTCTTGTTAA 327 0.422 MKVKKGWLAVQVEEESEEGGSNSQRFEIPISYLYHPLFKGLLDKAYEVYGYHPEGPLKLPCSVDDFLHLRWRIEKESIPHHHNHHHHHHHHHDHHHRQLPHALYFHSC* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1078 108 PANTHER SMALL AUXIN-UP RNA-RELATED 1 89 - -
Apr2g1078 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 89 IPR003676 GO:0009733
Apr2g1078 108 Pfam Auxin responsive protein 3 72 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1078 Apr-Chr2 17128447 17128935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1078 3 74 Calmodulin-binding Proteins AT3G43120 45.833 1.53e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1078 K14488 - gmx:100306557 159.458