Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1068 ATGTTGAAGGGTTTGGCCACAGTTGTTGTATTGTTGATGATTATTGCAACAGACACTGTGCAAGTGCAAGGTTTTCCCAGTGGGAAGAAAACTGTGCGTGTTCAAAATGATTTGGATGGTGGTACTCTTCTTTATCTCCATTGTCGATCCAAGGACAATGATCTTGGCTTGCATGTTCTTGCCACTCAAACCTATCAAGAATGGTCCTTCCATGATAACGTTAGTGGTACTACTCTCTTTTGGTGCAAATTCCAATTTGATGGCGTCGCCGAAGTTAGCTTTGAAATTTACAGTGCCAAAACCGATGATTCACAGTGTGGATCCCAATGCTGGCGAAGTATTAGAAAAGATGGAGCCTATTTTTATGATGAGTACAAAAAGATTTGGGTCCGAAGATACTCATGGTAA 408 0.4118 MLKGLATVVVLLMIIATDTVQVQGFPSGKKTVRVQNDLDGGTLLYLHCRSKDNDLGLHVLATQTYQEWSFHDNVSGTTLFWCKFQFDGVAEVSFEIYSAKTDDSQCGSQCWRSIRKDGAYFYDEYKKIWVRRYSW* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1068 135 Pfam Plant self-incompatibility protein S1 31 135 IPR010264 -
Apr2g1068 135 PANTHER - 16 121 IPR010264 -
Apr2g1068 135 PANTHER PUMILIO HOMOLOG 15-LIKE 16 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1068 Apr-Chr2 17012890 17013297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1068 16 119 Carbohydrate Esterase AT3G16970 35.185 3.78e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1068 - - aprc:113855712 159.458