Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1062 ATGTCACACATTGCTTTAACTGCATCAGCCACACTTTCCGCCGTTGCTTTTCACCGTAGAGCGAAGCGATGGAGCACGCTATTTCCGAGTTTTCGGAGATGCAGGGGAACCGGTTCGTCTTTGTATGCAAACTCTTCCAGGAAACGCTTGCAACTGCGGTTTTTTGCGTCGGGGAGAAGTAGCGGCAATGGAGGTGTTGCGGAGGAGATATCTGAAGCCGAAAAAGAGACTACGAATTTCGTTTGGCCTGATAGCAAGAAGCCTAGGGTGTGCATATTAGGCGGTGGATTTGGTGGTTTGTACACTGCTTTAAGGTTGGAATCACTGGAGTGGCCTGAGGATAAAAAACCACAGATTGTTCTTGTCGACCAGTCTGAGCGTTTTGTTTTCAAGCCAATGTTGTACGAGCTTCTATCTGGAGAAGTGGACGAATGGGAAATAGCTCCTCGTTTCTCAGATTTGCTGGCAAACACTAGTGTGCTGTTCTTCAAAGATAGAGTAAAATTTTTGCTTCCCTCTGATCATTGGGGAATGAATGGATCCAAAACATCTAGTTGCGGAGGAACAGTTCATCTTGAAAGTGGCCTTCTTATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTAGATGTTGTACCAGGAGCAGCAGAATTTGCAATTCCTTTCTCAACACTAGAGGATGCACGTAAAGTCAACTACAAATTAACAGCATTAGAGAGAAAGACCTTTGGTAAGGACTTCCAAATTAGTGTAGCTGTTGTTGGTTGTGGTTATTCTGGAGTTGAATTAGCTGCAACACTAGCAGAGAGATTACATAATAGAGGAATTGTGAGAGCAATTAATGTTGAAACAATGATTTGCCCAAATGCCCCACCTGGCAATAGGGAAGCTGCACTAAAAGTTCTTTCATCCAGAAAGGTCGAACTTTTATTGGGTTATTTTGTCCGCGGTATTCAGAGGCTCAGTGAATTGGAGTCTTCAGAAGTAGTACCTGATACTGAGAAATATATACTGGAGCTGCAACCTGCCGAAAGGGGAATGCAAAATAAAATCATCGAAGCAGATCTGGTATTGTGGACTGTTGGAACCAAACCTCCTCTTCCTCAGCTGGAACCTTCTGATGTACCATTTGTAATTCCTCTTAATGCCCGAGGACAAGCTGAAACAGATGAAACACTTCGTGTTAAGGGTCACCCTCGAATATTTGCCCTTGGTGACTCTTCTGCATTAAGGGATTCAAATGGAAGGATCCTTCCAGCCACTGCACAGGTTGCATTTCAGCAAGCAGACTTTACTGGTTGGAATCTATGGGCTGCAATCAATGGGCGTCCACTTTTGCCATTCAGGTTTCAGAATCTGGGTGAGATGATGACCCTGGGAAGAAATGATGCCACCGTTTCTCCGAGTTTTGTTGAGGGTCTAACCTTAGAAGGTTCTATTGGTCATGCTGCGAGGAAGATAGCTTACTTGATAAGGTTACCAACGGATGAACATAGGCTTAAAGTGGGGATCAGCTGGCTTACAAAATCTGCAATTGATTCTGTGTCATCGCTACAGAGTACCGTGTACAAGGTCCTTTCGGGCTCATAG 1602 0.4451 MSHIALTASATLSAVAFHRRAKRWSTLFPSFRRCRGTGSSLYANSSRKRLQLRFFASGRSSGNGGVAEEISEAEKETTNFVWPDSKKPRVCILGGGFGGLYTALRLESLEWPEDKKPQIVLVDQSERFVFKPMLYELLSGEVDEWEIAPRFSDLLANTSVLFFKDRVKFLLPSDHWGMNGSKTSSCGGTVHLESGLLIEYDWLVLALGAEAKLDVVPGAAEFAIPFSTLEDARKVNYKLTALERKTFGKDFQISVAVVGCGYSGVELAATLAERLHNRGIVRAINVETMICPNAPPGNREAALKVLSSRKVELLLGYFVRGIQRLSELESSEVVPDTEKYILELQPAERGMQNKIIEADLVLWTVGTKPPLPQLEPSDVPFVIPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDATVSPSFVEGLTLEGSIGHAARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQSTVYKVLSGS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1062 533 Gene3D - 85 506 - -
Apr2g1062 533 PRINTS FAD-dependent pyridine nucleotide reductase signature 90 109 - -
Apr2g1062 533 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 218 - -
Apr2g1062 533 PRINTS FAD-dependent pyridine nucleotide reductase signature 254 272 - -
Apr2g1062 533 PRINTS FAD-dependent pyridine nucleotide reductase signature 358 374 - -
Apr2g1062 533 PANTHER ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIAL 1 531 - -
Apr2g1062 533 Pfam Pyridine nucleotide-disulphide oxidoreductase 89 433 IPR023753 GO:0016491
Apr2g1062 533 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 531 - -
Apr2g1062 533 SUPERFAMILY FAD/NAD(P)-binding domain 78 417 IPR036188 -
Apr2g1062 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 89 111 - -
Apr2g1062 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 254 279 - -
Apr2g1062 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 359 373 - -
Apr2g1062 533 PRINTS Pyridine nucleotide disulphide reductase class-I signature 405 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1062 Apr-Chr2 16968085 16972909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1062 77 434 Chloroplast and Mitochondria Gene Families AT4G21490 24.138 3.15e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1062 K17872 - gmx:100795521 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1062 2 16968085 16972909 Apr2g1062 2 16968085 16972909 ECH