Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1060 ATGGTTCCAAGCAGCCACACCACCGAAATAGATGATAACTCTGAGGGTGAAAGCTTCCACAAGTTTTTTGAGGGTTGGATGGCTGAGCAAAACCAACATCTGAAGACCCTTTTAGCAGCTGAATCATCTCATCTCACAGATGAGCAAATGCAAGCACTGATTGGAGGGGTTGTTGAGCATTATGAGTACTATTACAAGGCCAAGTCAAGGTGTGCAAAGCATGATGTTTTGGCTATGTTGTCACCAACATGGAGAAGCTCCTTCGAGGAAGCTTTTCTTTGGATTGGTGGGTGGAGACCAAGCATGGCATTTCACTTGCTATATTCCAAGTCTGGTATGCAATTTGAGGCCAGGTTTCATGAACTTATTCAAGGTCTAAGAACATATGATTTGGGTGATTTATCAGCTGCACAACTTGTTCAGTTTGATGAGATGCAAAGGAGGACCATCTTAGAGGAAAGGGAAATCACTGATATGATGGCAAGGCACCAAGAAACAGTGGCTGATGCTTCCATGGTTGACTTGTCTCATGTGGTTTCAGAGATGATTAGAGCCAATGAAACTTCAGGCGAGGTTTATGAGAATAAGGAAATAGAGGACAAAGTTGATTCAACTTTGGTACCAAAAGAGGAAGGTTTGGAGAAGATTTTGTTGAAAGCTGATGAGTTAAGATTGAGAACACTTAAAGATGTTGTTAATATTTTGACTCCAAAACAGGCCATTCATTTCTTAATTGCTGCTGCAGAATTGCACTTGAGGCTGCATGAATGGGGCAAAAAGAAGGATGCTAGAAGAGGGAATCAAGGTTTTGGTGAGGGTAGAAGGCTTAGTTCATCAAGTTGA 843 0.4187 MVPSSHTTEIDDNSEGESFHKFFEGWMAEQNQHLKTLLAAESSHLTDEQMQALIGGVVEHYEYYYKAKSRCAKHDVLAMLSPTWRSSFEEAFLWIGGWRPSMAFHLLYSKSGMQFEARFHELIQGLRTYDLGDLSAAQLVQFDEMQRRTILEEREITDMMARHQETVADASMVDLSHVVSEMIRANETSGEVYENKEIEDKVDSTLVPKEEGLEKILLKADELRLRTLKDVVNILTPKQAIHFLIAAAELHLRLHEWGKKKDARRGNQGFGEGRRLSSSS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1060 280 PANTHER OS01G0159000 PROTEIN 12 267 - -
Apr2g1060 280 Pfam Seed dormancy control 33 109 IPR025422 GO:0006351|GO:0043565
Apr2g1060 280 PANTHER - 12 267 - -
Apr2g1060 280 ProSiteProfiles DOG1 domain profile. 16 264 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1060 Apr-Chr2 16948691 16949533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1060 18 254 bZIP Transcription Factor Family AT5G06960 26.749 1.52e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1060 - - gmx:100784399 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1060 2 16948691 16949533 Apr2g1060 2 16948691 16949533 ECH