Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1059 ATGGGCAGAGAAAATGTGTCAGCAATGGCAAAGGAAGAAGTAAAATTGGAAGAGAAGCAAACATTTGATGGAGAGAAGGCTACTTTGCTTATTAGAGAGCTCAGAAAGAGCTTTGATTCAGGCAAGACAAAGAGCTATGAATGGAGGGTTTCCCAGTTGGGAGCCGTAGCTAGGATGCTAGAAGAGAAAGAGAAGGAAATTACTGAAGCTCTTTATCAGGACCTTTCTAAACCTGAACTCGAAGCTTTTATATCTGAGATTTCCCAGGCAAAATCCTCATGTAGTGAAGCTCTTCAAGAGCTGAAACATTGGATGAAGCCTGAAAAGGTGAATACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTATCAGAACCACTGGGAGTTGTGTTGGTCATCTCAACATGGAACTTTCCTTTCTTGCTATCAATGGATCCAGTCATTGGAGCCATTTCAGCTGGTAATGCGGTAGTCCTGAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCAAATTTGATTGAAAAATATCTAGACAACTCTTCCATAAGAGTTGTTGAAGGGGCTATACCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTCTACACAGGTAGTGCTAGAGTGGGTCGCATTGTCATGGCTGCTGCTGCAAAGCATCTTACACCAGTGGTTCTTGAACTTGGTGGAAAGTGTCCAGCTGTGGTGGATTCAGATGTCAATTTACAAGTTACTGCTAGGAGAATAATAGCTGGCAAGTGGGCGTGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAGTTTGCTCCTACACTTATAAATGTTTTGAAAGAAGAATTGGAGCAATTTTTTGGGAAAGATCCCATTGAATCAAAAGACATGTCACGTATTGTGTCTCCAAACCAGTTTGCACGGCTTGTGAAGCTCATGGATGAGGGTAAAGTATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGGAGAAATTAAAGATTGCCCCAACTGTTATATTGAATGTTCCAGAAGATGCTATGGTAATGCAAGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTGAACAATATAGAAGATAGCTTCAGTATAATCAAATCAAAGCCTAAACCTCTTGCTGCATATCTCTTCACTAACAATGAGAAGCTGAAGAAGGATTATGTGGAAAATATATCTTCCGGAGGGATGCTCATCAACGACGCTGTCATACATGTTGCAACTCGTGGTTTACCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTCTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCACAAAAAGTCAGTTCTTTATAGAAGTTTTGATGCAGATTCATCCCTAAGGTACCCCCCATATACCCCTCAAAAGGAAAAACTGTTGAAGGCCGTTATCAGTGGCAATATTTTTCAAATAATTCTTGCATTGTTTGGATGGTCTTGA 1500 0.4053 MGRENVSAMAKEEVKLEEKQTFDGEKATLLIRELRKSFDSGKTKSYEWRVSQLGAVARMLEEKEKEITEALYQDLSKPELEAFISEISQAKSSCSEALQELKHWMKPEKVNTSITTFPSSAEIVSEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIEKYLDNSSIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVVLELGGKCPAVVDSDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPTLINVLKEELEQFFGKDPIESKDMSRIVSPNQFARLVKLMDEGKVSDKIVLGGQRDEEKLKIAPTVILNVPEDAMVMQEEIFGPILPIITVNNIEDSFSIIKSKPKPLAAYLFTNNEKLKKDYVENISSGGMLINDAVIHVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKEKLLKAVISGNIFQIILALFGWS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1059 499 SUPERFAMILY ALDH-like 31 472 IPR016161 GO:0016491
Apr2g1059 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 236 436 IPR016163 GO:0016620
Apr2g1059 499 Pfam Aldehyde dehydrogenase family 21 456 IPR015590 GO:0016491
Apr2g1059 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 35 454 IPR016162 GO:0016491
Apr2g1059 499 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 10 499 - -
Apr2g1059 499 PIRSF ALDH 10 495 IPR012394 GO:0006081
Apr2g1059 499 PANTHER ALDEHYDE DEHYDROGENASE 10 499 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1059 Apr-Chr2 16934820 16939959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1059 17 499 Aldehyde Dehydrogenase Gene Family AT4G34240 69.565 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1059 K00128 - gmx:100800699 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1059 2 16934820 16939959 Apr2g1059 2 16934820 16939959 ECH