Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1018 ATGGACACCAATCAAAACACTAGTGCATTCACAAATGTGAACAGCACTTGGAATCTCGAAAAGAAGGAAACAAATGAACAACAACATGACCATGTTATTCTTCAAATCCAAGACCACCAAATCCCTATGGGTTCTGGGATGTGGCCTAACAACTACCACCACAACCACCACCACAACCTCCTTCAAATTCATCAAACACCAACCTCATCATCATCCATCATAGCACCACCCTCCTCCTCACCATCAGGGTTCCTCAGTGACATACTAGGTGTTCACAACATAGAAGAAGATGAAGAACCAGAAGAAGAGTTAGGAGCCATGAAGGAGATGATGTACAAGATCGCTGCTATGCAACCAGTGGACATCGACCCTGCCACCATCCGAAAACCAAAGAGGAGAAACGTTCGCATCAGTGACGACCCTCAAAGTGTTGCTGCACGGCACAGAAGAGAGAGAATCAGTGAGAAAATCCGCATCCTCCAAAGACTTGTCCCTGGAGGAACCAAAATGGACACAGCTTCAATGCTTGATGAAGCCATTCGCTATGTTAAGTTCTTGAAGAGACAAATCAGGTTGCTCCAATCCATTCCTCAAACTCAACACCCTTCACAACCACCGCAATGCATTGGTGGCGTTGCTAGTACTCATGCTAGCACCTTGTTGTTAGCCCCTTCTTGTGATTGGCCTTTTGCACCAAATGTGTTACTCAGTTCCACCGCCGTCACTGCCGCCTCTTCTTCCTCCATGGACATACCGGCCGGACTCGGTTTCGATGCCGGCGGGCATGGCCACAGTCATGCTTGTGATGGCTCCTCCAGCTTCAATCATCACGAGGTAATCAGTGAATAA 849 0.4759 MDTNQNTSAFTNVNSTWNLEKKETNEQQHDHVILQIQDHQIPMGSGMWPNNYHHNHHHNLLQIHQTPTSSSSIIAPPSSSPSGFLSDILGVHNIEEDEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQTQHPSQPPQCIGGVASTHASTLLLAPSCDWPFAPNVLLSSTAVTAASSSSMDIPAGLGFDAGGHGHSHACDGSSSFNHHEVISE* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1018 282 Gene3D - 140 203 IPR036638 GO:0046983
Apr2g1018 282 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Apr2g1018 282 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 9 270 - -
Apr2g1018 282 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 201 IPR036638 GO:0046983
Apr2g1018 282 CDD bHLH_AtIND_like 138 195 - -
Apr2g1018 282 Pfam Helix-loop-helix DNA-binding domain 147 186 IPR011598 GO:0046983
Apr2g1018 282 SMART finulus 143 192 IPR011598 GO:0046983
Apr2g1018 282 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 9 270 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1018 Apr-Chr2 16519244 16520236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1018 106 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 83.146 8.83e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr2g1018 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1018 - - aprc:113856609 541.191