Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1016 ATGACGAGTATCCTTCTTGATTGTGCGAACAACATAGTGGGGAGACTAACTAATCTCATAATAGATGAGACTCGTAACGTTTGCTGCTTCAATTGCATTGTGGATGACTTTGAAAAGGAAAAACCAGCGTTGGAAGCGAAATGGAAAACCATATGCAAAGATGTCGAAGATGCAAGAAGAAATACTGAGGAAATTCATGATGATGTTACCCATTGGCAAGGAGAAGCTGAAAAGGTCATTAATGAGGATACCAAAGCAAAAAAGGCTTGTTTTTGGGGATGGTGTCCTAATTGCATTTGGCGATATCATAGGGGCAAAGAACTAACACAAATGACAAACGATATTACAAGACTCAAGGGAACCACCTTTGACCGTGTTGGACGTGCTCCTCATCTTTCAGGCATAGAAAGCCATTCTTCACAAAGTTTCATTCATTTTGAAAGCAGAGATTTAGAATACAAACAGGTTTTGGATGCAATGGCAGATGAGGACACGTATATCATTGCACTCCAAGGAATGGGTGGAACTGGAAAAACTACACTTGCTAAAGAAGTTGGTAGAAAACTTGAGAAATCTGGAAAGTTTGATCATGTCATCTTTACAACTGTGTCAGATGCTCCAGATATCAAAAAGATTCAAGATAGTATTGCAGGACCCTTAGGATTGTCGTTGAAAGACAAAAATGAATGGGAAAGACGCAACACACTACGGCAGAGATTAACTGACCGAGAGAAAATTCTCGTAATGTTAGATGATGTGTGGGAACCAATTAGTTTTGAAGAAATAGGGATTCCTTCTGGTGAGAATCACAATAATTGCAAAGTTCTTTTGACCTCACGCAATGTAAGTGTGTGTAATTCAATGGGATGTCCAAGGCCAATTCAACTGGGGCTTTTGTCAGATCAAGATGCGTGGATCCTATTCAGAAAGCATGCTGGTGTAGATGATGTTTTGTCCAAAAATTTTCAGGATAAAGGGCAGGAAATTACAAATGAATGTAAAAATTTACCGGTTGCCATCGCAGCCATAGCCAGCACTTTGAAGAATAGACCCCTTGAAGAATGGGATGCAGCTTTGACAGCCTTGAGAAATCCTATGCCCATGCTCGATGTTGATGAAAATTTGAGAAATATTTATAGAAGTTTAAGGTATAGCTATGAAAATATGAAGAGTGAAATAGCCAAAAGATTCTTCCTTTTACTGTCTATATTCCCAGCAGATACAGAAGTACCTATAGAACTTCTAACTAAATTTGGCATAGGGGCAGGTTTTTTTGGGGAAGTTGACAAATACTCTGAAGCCAGAAGCCAAGTGCTTTCAGTAAAAAATAAACTCATAAATTCTTGTTTATGGTTGGATGCTGAGAACAATTGTGTGAAGTTGCATGACTTGATTCGTGACGTGGCCCTCTGGATAGCTAATGGAGACATTCAATTCATTGCGCTATCTGAGAAAAAACGGAAGGCATTAGCCAATAAAGAGATGAGAATTAAATATTTGTGTTGTAAGGACTTGCAGGTTGGTGACATGGAAAGCTTTCCTAGTTGGTTTGATGGTTCCAAACTTGAGTTTCTATTGATATCCATGGAAGCAAGCGATCCTGTAGAAGTCCCAAATACGTTCTTTGAAAAAATGACAAGGCTTGGAGTTTTGTATTTAACACATGATGATACGTCAAAGCTTCCTCTGACGCTGTCAATTTCGGACAAGTCATTGACAAATATTCGAACTCTTGTGCTGGCTGATTGGGAATTAGGTGACATCTCTTTTTTGGTAATCCTGCCAAGGCTTGAGATTCTTTCTTTGAGTAGTTGTTCAATAAGGGAGTTGCCAATTGCAATTACAAAATTGGAGAAACTGAGACTGTTGGAGATGGAAGACTGTGAAATTGAAAGGAATAACCCATTTGAAGTGATTGAAAGATGCTTACAACTGGAAGAATTGTATTTCGTTGACAATAAACTTCTAATCCTTGATACTACAGATGAAGTTGAAGCAATTCATCATCTAAATACGACATTTCCTACATTGAATAGGTATTGTTTACAAAGGAATTCGGCAGTGCGTGATTCAAGATCAAAAGTTGTCTGTCTTCCAAATATTGAAGCTTTGGTCTCTGAAGCAACATTTAAGGCTCTAGTGCAAGGAGCAGAAGTTCTTCAACTGGAAGAAATTGAGGGGGAGTGGAGAAATCTCATTCCTGAGATTGTTCCAATGGAAGGTAATGGCATGAATGATTTAATTGAGCTCAGTTTGGAATCTTGTTCAGAGGTACAATGCCTTGTCAACACTAAGCATCATTATTCTGCTGCACCAAATGTCTTCTCCAAGTTGGTTGCACTAGATCTTGTAAATATGGATAGCTTGGAAGAACTGTGCATTGGTCCCATTCCTTCTGAATTTCTAAAGAGTTTACAGAGGCTGAACATAGAACAGTGTAAGAATTTACGAGAACAGTTGAACAAGCTTGACCTTCGCCATCTCAAGATCCTGGAACTGGTAAGTTGTCCAAAGTGGGCATCCCTATTTCCACCATTCACTGCTCGAAGTTTAGTTCTGTTAGAGGAATTGAGAATACGCAAATGTGACCAATTGACAAACATAATAGCAGGTGAAGGATCAAAGGACAAAAAAAAAGAAAGGTTAGATGGCAAAAATGATCACAAGAGCGATGGCTCAGTGTTTCCAAAATTAAAAATCCTTGAGATTAAAAAATGTGATCGATTAGAATGTATTCTTTCAGTCCTTTCTCCTGTGGACATTCCAATATTGGAAACTATCACAATAGTTGATTGTGGCGAGTTGAAACACATGTTTGGTGGTTGCCAACATGAAGACCAAGATGTCGTACTTGGTTCATTGCAAGAAATGGAACTTCGCGGCTTGTCAAATTTCACATGCATTTCTATAGAATGTTACCCTCTTACATCTTCTTCATCAAAGAAGAGGTCATTTTCAAGAATTGGTTCCAAGGCAAAACAAATAAACCTCAGCAAACGAAAAATGATTTTCCAATCCTATTTATGTTGTGGTCGTAGAAGAAATGAAGGAAAATTGAGGAATGACACAAGTATCAAAATGCCTGCGGTTTCCATGACTGCTCAAATAGATCGCTCTACTTCTTCGGTAAAGTGTTCTCTCTCTGTTTTTTTATTTTATTTATTGTATATTTTTACAACCACGTTTTACTTAACTACTATCCCAACCTTAAATATTAGCATTGAAATTTGA 3231 0.381 MTSILLDCANNIVGRLTNLIIDETRNVCCFNCIVDDFEKEKPALEAKWKTICKDVEDARRNTEEIHDDVTHWQGEAEKVINEDTKAKKACFWGWCPNCIWRYHRGKELTQMTNDITRLKGTTFDRVGRAPHLSGIESHSSQSFIHFESRDLEYKQVLDAMADEDTYIIALQGMGGTGKTTLAKEVGRKLEKSGKFDHVIFTTVSDAPDIKKIQDSIAGPLGLSLKDKNEWERRNTLRQRLTDREKILVMLDDVWEPISFEEIGIPSGENHNNCKVLLTSRNVSVCNSMGCPRPIQLGLLSDQDAWILFRKHAGVDDVLSKNFQDKGQEITNECKNLPVAIAAIASTLKNRPLEEWDAALTALRNPMPMLDVDENLRNIYRSLRYSYENMKSEIAKRFFLLLSIFPADTEVPIELLTKFGIGAGFFGEVDKYSEARSQVLSVKNKLINSCLWLDAENNCVKLHDLIRDVALWIANGDIQFIALSEKKRKALANKEMRIKYLCCKDLQVGDMESFPSWFDGSKLEFLLISMEASDPVEVPNTFFEKMTRLGVLYLTHDDTSKLPLTLSISDKSLTNIRTLVLADWELGDISFLVILPRLEILSLSSCSIRELPIAITKLEKLRLLEMEDCEIERNNPFEVIERCLQLEELYFVDNKLLILDTTDEVEAIHHLNTTFPTLNRYCLQRNSAVRDSRSKVVCLPNIEALVSEATFKALVQGAEVLQLEEIEGEWRNLIPEIVPMEGNGMNDLIELSLESCSEVQCLVNTKHHYSAAPNVFSKLVALDLVNMDSLEELCIGPIPSEFLKSLQRLNIEQCKNLREQLNKLDLRHLKILELVSCPKWASLFPPFTARSLVLLEELRIRKCDQLTNIIAGEGSKDKKKERLDGKNDHKSDGSVFPKLKILEIKKCDRLECILSVLSPVDIPILETITIVDCGELKHMFGGCQHEDQDVVLGSLQEMELRGLSNFTCISIECYPLTSSSSKKRSFSRIGSKAKQINLSKRKMIFQSYLCCGRRRNEGKLRNDTSIKMPAVSMTAQIDRSTSSVKCSLSVFLFYLLYIFTTTFYLTTIPTLNISIEI* 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1016 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 400 IPR027417 -
Apr2g1016 1076 Pfam NB-ARC domain 154 388 IPR002182 GO:0043531
Apr2g1016 1076 Gene3D - 298 385 IPR042197 -
Apr2g1016 1076 Gene3D - 386 470 IPR036388 -
Apr2g1016 1076 Gene3D Ribonuclease Inhibitor 481 673 IPR032675 -
Apr2g1016 1076 PANTHER - 54 969 - -
Apr2g1016 1076 SUPERFAMILY L domain-like 460 933 - -
Apr2g1016 1076 PRINTS Disease resistance protein signature 167 182 - -
Apr2g1016 1076 PRINTS Disease resistance protein signature 240 254 - -
Apr2g1016 1076 PRINTS Disease resistance protein signature 333 347 - -
Apr2g1016 1076 PRINTS Disease resistance protein signature 800 816 - -
Apr2g1016 1076 Gene3D Ribonuclease Inhibitor 820 948 IPR032675 -
Apr2g1016 1076 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 54 969 - -
Apr2g1016 1076 CDD AAA 149 279 - -
Apr2g1016 1076 Gene3D - 135 293 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1016 Apr-Chr2 16485671 16490076 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1016 164 591 WRKY Transcription Factor Family AT5G45050 24.099 6.98e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1016 - - aprc:113855693 2127.44