Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1012 ATGGCTTCTCTCTTCTATCTCTCTCTCCTCCTAATCCTAACCCTCTCCTCTGCCACGCACCACCACCATTCCCCCTCCATTTCCGCCGCCGCCTCGTCGGATATTCAACAAGCCTGCAAGGCCACGCGCTTCCCCCAGCAATGCGAATCCTCTCTTTCCCAATCCCAGAACCTCCCTCCCAACCCCACCCCTCTCCAACTCCTCCAATCCGCCATCGCCGTCACCTCCGACAACCTCGCCACCGCGCAGTCCATGGTCAAGTCCATCCTCGCCTCCTCCTCCGACAGCCGCAACCGCACCGTCGCCGCCACCACCTGCATCGAGGTCCTCACCAACTCCTACCACCGCATTTCCCTCGCCAACGATGCCCTGCCACGAGGCAGAACCAAGGACGCTCGCGCCTGGCTCAGCGCTGCCCTCGCCTACCAGTACGACTGCTGGAACGGCCTCAAGTACGCCAACGACACCCAAATGGTCTCCAAAGCGATGTCGTTTATCGACTCCCTCACCACCCTCTCCAGCAACGCCCTCAGCATGGCCTTCTCCTTCGACGCCTTCGGAACCGACACCGCCTCGTGGAAACCGCCCGCAACGGAGCGCAACGGTTTCTGGGAATCCGCTGGGTCGGGCGGAGGATCCGGACCCGGCTCCGACGGTGGTGTTCCGTCCAAGTTAACGCCAGACGTTACGGTCTGTAAGGGTGGAGGGAACGAGTGTTATAAGACAGTGCAGGAAGCCGTTAACGCTGCGCCAGATAACGCCGCTGAGACGCGGAGGTTCGTGATACACATAAAAGAAGGGGTTTACGAGGAAACCGTTAGGGTTCCGTTAGGGAAGAGGAATGTGGTGTTCTTAGGCGACGGAATGGGCAAAACGGTCATCACTGGCTCTGCAAACGTTGGACAACCCGGGATGACCACTTACAACTCTGCCACAGTGGCGGTTCTTGGGGATGGATTCATGGCTAAGGATCTGACGATTGAAAACACAGCAGGGCCTGATGCTCATCAAGCAGTGGCTTTGAGATTAGACAGTGATCTTTCTGTGATTGAGAGTTGTGAATTCTTAGGCAATCAAGATACTCTTTATGCTCACTCTCTCCGACAATTTTACAAGCTATGCCGCATTGTGGGTAACGTGGATTTCATCTTTGGAAACTCTGCCGCCATTTTCCAAGACTGTCAAATCCTTGTTCGTCCCAGGCAAGTGAAGCCCGAGAAGGGTGAGAACAATGCCATCACTGCGCATGGCAGAACAGACCCTGCACAGACTACGGGCTTCGTTTTCCAAAACTGTTTGATTAATGGCACTGAGGATTATATGGTATTGTATCGCAGCAAACCTCAAGTGCACAAGAACTACTTGGGTAGGCCTTGGAAGGAGTTTTCTAGGACTGTTTTCATTCGTTCAGTTTTGGAAGCCATTGTCATTCCTCAGGGTTGGATGCCATGGAGTGGTGACTTTGCTCTCAAGACACTCTACTATGGAGAATTTAATAACTCCGGACCCGGTTCTGATTTGTCTCAGAGGGTGTCATGGAGTAGCAAGATCCCTTCTGAGCATGTGTTAACATATTCAGTTCAGAATTTCATTCAAGGAAATGATTGGATTCCATCGTCTCAGTAA 1626 0.5344 MASLFYLSLLLILTLSSATHHHHSPSISAAASSDIQQACKATRFPQQCESSLSQSQNLPPNPTPLQLLQSAIAVTSDNLATAQSMVKSILASSSDSRNRTVAATTCIEVLTNSYHRISLANDALPRGRTKDARAWLSAALAYQYDCWNGLKYANDTQMVSKAMSFIDSLTTLSSNALSMAFSFDAFGTDTASWKPPATERNGFWESAGSGGGSGPGSDGGVPSKLTPDVTVCKGGGNECYKTVQEAVNAAPDNAAETRRFVIHIKEGVYEETVRVPLGKRNVVFLGDGMGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKDLTIENTAGPDAHQAVALRLDSDLSVIESCEFLGNQDTLYAHSLRQFYKLCRIVGNVDFIFGNSAAIFQDCQILVRPRQVKPEKGENNAITAHGRTDPAQTTGFVFQNCLINGTEDYMVLYRSKPQVHKNYLGRPWKEFSRTVFIRSVLEAIVIPQGWMPWSGDFALKTLYYGEFNNSGPGSDLSQRVSWSSKIPSEHVLTYSVQNFIQGNDWIPSSQ* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1012 541 CDD PMEI-like_3 38 179 - -
Apr2g1012 541 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 182 IPR035513 -
Apr2g1012 541 Gene3D - 222 541 IPR012334 -
Apr2g1012 541 PANTHER PECTINESTERASE 9 539 - -
Apr2g1012 541 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 178 IPR006501 GO:0004857
Apr2g1012 541 MobiDBLite consensus disorder prediction 197 225 - -
Apr2g1012 541 Pfam Plant invertase/pectin methylesterase inhibitor 34 179 IPR006501 GO:0004857
Apr2g1012 541 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 9 539 - -
Apr2g1012 541 SUPERFAMILY Pectin lyase-like 226 539 IPR011050 -
Apr2g1012 541 Pfam Pectinesterase 228 534 IPR000070 GO:0030599|GO:0042545
Apr2g1012 541 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 179 IPR035513 -
Apr2g1012 541 SMART PMEI_2 30 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1012 Apr-Chr2 16431070 16432842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1012 24 536 Carbohydrate Esterase AT5G09760 65.698 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1012 - - gmx:100819675 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1012 2 16431070 16432842 Apr1g0467 1 5763857 5766371 PCT