Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1002 ATGGAGTTTTTGGACGAGGACACGAAGCCAAGGTTCGTGTTTCAGTCTGGAGCAGTTGCAAGCACAGAGCCACAACCGAACCACAAACCAACCAAGCCATTCGTCTTCGTCACCGTTTCTCTCTCTTCCCTCTTGCTCACACTGTCTCTCTTCTTCCTCCAATCCGAACCCTTCAAATCGCTCCTCTTATGGCTCTCACTCTCTCTCTTCCTCGGTCCCTTCGCTCCTCCCTCCCTCACCGGCGGCGATGTCCGCGTCGGCCGCGGCCACGTCGTTCACTTCCCCGATCCGGAACCCGAACCCGACGACGATGCTGATAGGAGACCTTTGCAGCGACGATCGAAGCCGCGCAGATCCGAGGATAAGAGAAGAGGCGATGGTGGAATAGAGAACCGTGTGGCGGTGGTGGAGGAGGAGAAGGAGTGGAAGGAAGAGGACGTGGAGGTGCTGAAGAAGCAGATGGCGAAGCATCCGGTTGGGAAACCGGGACGGTGGGAGGCGATTGCAGCGGCGTTCGGAGGGAGGCACGGTGTGGAGAGTGTGATAAAAAAGGTGAAGGAGTTGGGGGAGAAGAGAGTGGATGATTCGGAGTCGTATGCGTTGTTCTTGAAGAAGAGGAAAGCATTGGATAAGAGAGTTGTGGAGAACGGGGGCGAAGATTTAGGTGGTGGAAGCTCTGTGACGGTTGAGAGTGGTTGGAGTTCTGGAGAGGATATTGCGTTGTTGAATGCTTTGAAAGCGTTTCCTAAGGATGTTTCCATGAGATGGGAGAAGGTTGCTGCTGCGGTTCCTGGAAAATCCAAGGCCGCTTGCATGAAAAGATTTGCTGAATTGAAGAAAGGGTTTCGGAGTTCAAAGGCTGCTGCGGATGGGTAG 876 0.5422 MEFLDEDTKPRFVFQSGAVASTEPQPNHKPTKPFVFVTVSLSSLLLTLSLFFLQSEPFKSLLLWLSLSLFLGPFAPPSLTGGDVRVGRGHVVHFPDPEPEPDDDADRRPLQRRSKPRRSEDKRRGDGGIENRVAVVEEEKEWKEEDVEVLKKQMAKHPVGKPGRWEAIAAAFGGRHGVESVIKKVKELGEKRVDDSESYALFLKKRKALDKRVVENGGEDLGGGSSVTVESGWSSGEDIALLNALKAFPKDVSMRWEKVAAAVPGKSKAACMKRFAELKKGFRSSKAAADG* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1002 291 ProSiteProfiles SANT domain profile. 228 283 IPR017884 -
Apr2g1002 291 ProSiteProfiles Myb-like domain profile. 233 279 IPR001005 -
Apr2g1002 291 PANTHER TRANSCRIPTION FACTOR MAMYB 1 289 - -
Apr2g1002 291 SUPERFAMILY Homeodomain-like 139 178 IPR009057 -
Apr2g1002 291 SMART sant 229 281 IPR001005 -
Apr2g1002 291 SMART sant 138 191 IPR001005 -
Apr2g1002 291 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 289 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Apr2g1002 291 SUPERFAMILY Homeodomain-like 228 279 IPR009057 -
Apr2g1002 291 CDD SANT 233 279 IPR001005 -
Apr2g1002 291 Gene3D - 224 291 - -
Apr2g1002 291 Gene3D - 136 194 - -
Apr2g1002 291 Coils Coil 133 153 - -
Apr2g1002 291 MobiDBLite consensus disorder prediction 90 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1002 Apr-Chr2 16275500 16276804 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr2g1002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1002 - - gmx:100780658 391.349